CATH Domain: 1gqiA03 XML data for domain: 1gqiA03

Molscript image for 1gqiA03
1gqiA03
PDB coordinates for domain 1gqiA03

PDB 1gqi, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.1330 Alpha-d-glucuronidase, C-terminal Domain
3.90.1330.10 Alpha-d-glucuronidase, C-terminal Domain Gene3D
3.90.1330.10.1
3.90.1330.10.1.1
3.90.1330.10.1.1.1
3.90.1330.10.1.1.1.1
3.90.1330.10.1.1.1.1.1

[top]
Segment boundaries for domain 1gqiA03

Chopping figure for domain 1gqiA03
DomainStart PDB ResidueStop PDB Residue
1gqiA01 18 148
1gqiA02 153 472
1gqiA03 476 712

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.90.1330.10.1.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1l8nA03 88.22 Geobacillus stearothermophilusAlpha-glucuronidase 3.90.1330.10 205 30 85 1.58 1.85
[1]
Displaying entries 1 to 1 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1gqiA03
SAATAADEWLRMTFSNQPAFIEPVKQMMLVSREAGVNYRSPLGLTHLYSQGDHYGPAPWTDDLPRADWTAVYYHRASKTG
IGFNRTKTGSNALAQYPEPIAKAWGDLNSVPEDLILWFHHLSWDHRMQSGRNLWQELVHKYYQGVEQVRAMQRTWDQQEA
YVDAARFAQVKALLQVQEREAVRWRNSCVLYFQSVAGRPIPANYEQPEHDLEYYKMLARTTYVPEPWHPASSSRVLK
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1gqiA03
SAATAADEWLRMTFSNQPAFIEPVKQMMLVSREAGVNYRSPLGLTHLYSQGDHYGPAPWTDDLPRADWTAVYYHRASKTG
IGFNRTKTGSNALAQYPEPIAKAWGDLNSVPEDLILWFHHLSWDHRMQSGRNLWQELVHKYYQGVEQVRAMQRTWDQQEA
YVDAARFAQVKALLQVQEREAVRWRNSCVLYFQSVAGRPIPANYEQPEHDLEYYKMLARTTYVPEPWHPASSSRVLK
BLAST against CATH

[top]
Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:03

Assigning to "3.90.1330.10" based on similarity with "1gqlB03" (NWSI: 100, NWO: 100, SPS: 98.01, SPO: 96, RMSD: 0.38)

Flow stage update by auto on 28 Apr 2006 17:49

NW result present for Domain "1gqiA03"

Flow stage update by auto on 28 Apr 2006 17:43

All required files are present for Domain "1gqiA03"

Flow stage update by auto on 27 Apr 2006 17:30

Beginning processing for Domain "1gqiA03"

Insertion by auto on 08 Mar 2006 18:46

Final ChopClose added based on similarity with "1gqiB" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 98.80, SI: 100, SO: 100]