CATH Domain: 1gq6B00 XML data for domain: 1gq6B00

Molscript image for 1gq6B00
1gq6B00
PDB coordinates for domain 1gq6B00

PDB 1gq6, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.800 Arginase; Chain A
3.40.800.10 Gene3D
3.40.800.10.3
3.40.800.10.3.1
3.40.800.10.3.1.1
3.40.800.10.3.1.1.1
3.40.800.10.3.1.1.1.1

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Segment boundaries for domain 1gq6B00

Chopping figure for domain 1gq6B00
DomainStart PDB ResidueStop PDB Residue
1gq6B00 9 309

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.800.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1xfkA00 84.93 Histidine metabolismMetabolic pathwaysFormiminoglutamase [EC:3.5.3.8]Vibrio choleraeFormimidoylglutamase 3.40.800.10 324 19 89 3.71 4.13
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1gq6B00
SPRYAQIPTFMRLPHDPQPRGYDVVVIGAPYDGGTSYRPGARFGPQAIRSESGLIHGVGIDRGPGTFDLINCVDAGDINL
TPFDMNIAIDTAQSHLSGLLKANAAFLMIGGDHSLTVAALRAVAEQHGPLAVVHLDAHSDTNPAFYGGRYHHGTPFRHGI
DEKLIDPAAMVQIGIRGHNPKPDSLDYARGHGVRVVTADEFGELGVGGTADLIREKVGQRPVYVSVDIDVVDPAFAPGTG
TPAPGGLLSREVLALLRCVGDLKPVGFDVMEVSPLYDHGGITSILATEIGAELLYQYARAH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1gq6B00
MERIDSHVSPRYAQIPTFMRLPHDPQPRGYDVVVIGAPYDGGTSYRPGARFGPQAIRSESGLIHGVGIDRGPGTFDLINC
VDAGDINLTPFDMNIAIDTAQSHLSGLLKANAAFLMIGGDHSLTVAALRAVAEQHGPLAVVHLDAHSDTNPAFYGGRYHH
GTPFRHGIDEKLIDPAAMVQIGIRGHNPKPDSLDYARGHGVRVVTADEFGELGVGGTADLIREKVGQRPVYVSVDIDVVD
PAFAPGTGTPAPGGLLSREVLALLRCVGDLKPVGFDVMEVSPLYDHGGITSILATEIGAELLYQYARAHRTQL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:51

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"