Set cath from cathlist by auto on 05 Mar 2006 19:07
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
CATH Domain: 1gpeA03
1gpeA03
PDB 1gpe, Chain A, Domain 3
Segment boundaries for domain 1gpeA03
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1gpeA01 | 8 | 57 |
| 1gpeA01 | 240 | 328 |
| 1gpeA01 | 439 | 455 |
| 1gpeA01 | 523 | 557 |
| 1gpeA01 | 575 | 587 |
| 1gpeA02 | 58 | 86 |
| 1gpeA02 | 97 | 113 |
| 1gpeA02 | 222 | 239 |
| 1gpeA03 | 114 | 221 |
| 1gpeA03 | 329 | 438 |
| 1gpeA03 | 456 | 522 |
| 1gpeA03 | 558 | 574 |
Structural Neighbourhood (0 entries)
Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.
Domain ATOM Sequence
>pdb|1gpeA03 SWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMKAL MNTVSALGVPVQQDFLCGHPRGVSMIMNNMQDQTTTTVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNTKLDQW AEETVARGGFHNVTALKVQYENYRNWLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGPKFFLNEFDLLGQAAASKLARD LTSQGAMKEYFAGETLPGYNLVQNATLSQWSDYVLQNFRPNWHAVTQVSSHVMTIFYGMALK
Domain COMBS Sequence
>pdb|1gpeA03 SWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMKAL MNTVSALGVPVQQDFLCGHPRGVSMIMNNMQDQTTTTVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNTKLDQW AEETVARGGFHNVTALKVQYENYRNWLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGPKFFLNEFDLLGQAAASKLARD LTSQGAMKEYFAGETLPGYNLVQNATLSQWSDYVLQNFRPNWHAVTQVSSHVMTIFYGMALK
Domain History Events (3)
Flow stage update by auto on 05 Mar 2006 19:07
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
Insertion by auto on 05 Mar 2006 16:40
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"
