CATH Domain: 1gkuB08 XML data for domain: 1gkuB08

Molscript image for 1gkuB08
1gkuB08
PDB coordinates for domain 1gkuB08

PDB 1gku, Chain B, Domain 8

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.290 Topoisomerase I; domain 4
1.10.290.10 Topoisomerase I, domain 4 Gene3D
1.10.290.10.3
1.10.290.10.3.1
1.10.290.10.3.1.1
1.10.290.10.3.1.1.1
1.10.290.10.3.1.1.1.1

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Segment boundaries for domain 1gkuB08

Chopping figure for domain 1gkuB08
DomainStart PDB ResidueStop PDB Residue
1gkuB01 1 20
1gkuB01 556 582
1gkuB02 33 245
1gkuB03 246 352
1gkuB03 426 504
1gkuB04 353 425
1gkuB05 505 555
1gkuB05 608 677
1gkuB06 678 732
1gkuB06 954 1054
1gkuB07 733 771
1gkuB07 891 953
1gkuB08 772 890

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1gkuB08
PPYTTETMLSDANRILKFSVKQTMQIAQELFENGLITYHRTDSTRVSDVGQRIAKEYLGDDFVGREWGESGAHECIRPTR
PLTRDDVQRLIQEGVLVVEGLRWEHFALYDLIFRRFMAS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1gkuB08
PPYTTETMLSDANRILKFSVKQTMQIAQELFENGLITYHRTDSTRVSDVGQRIAKEYLGDDFVGREWGESGAHECIRPTR
PLTRDDVQRLIQEGVLVVEGLRWEHFALYDLIFRRFMAS
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 22 Aug 2007 22:16

Assigning to "1.10.290.10" based on similarity with "1cy0A04"

Flow stage update by auto on 22 Aug 2007 22:08

No in_process hits for Domain "1gkuB08" ready to be processed

Flow stage update by auto on 22 Aug 2007 22:08

NW result present for Domain "1gkuB08"

Flow stage update by auto on 22 Aug 2007 10:08

All required files are present for Domain "1gkuB08"

Flow stage update by auto on 21 Aug 2007 17:49

Beginning processing for Domain "1gkuB08"

Insertion by cuff on 21 Aug 2007 11:33

nice chopping