CATH Domain: 1gklA00 XML data for domain: 1gklA00

Molscript image for 1gklA00
1gklA00
PDB coordinates for domain 1gklA00

PDB 1gkl, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1820 Gene3D
3.40.50.1820.14
3.40.50.1820.14.1
3.40.50.1820.14.1.1
3.40.50.1820.14.1.1.1
3.40.50.1820.14.1.1.1.1

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Segment boundaries for domain 1gklA00

Chopping figure for domain 1gklA00
DomainStart PDB ResidueStop PDB Residue
1gklA00 803 1085

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 3.40.50.1820.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1jjfA00 85.45 Endo-1,4-beta-xylanase ZClostridium thermocellum ATCC 27405 3.40.50.1820 255 26 85 2.16 2.53
2qm0B01 79.47 Bacillus cereus ATCC 14579IroE protein 3.40.50.1820 256 15 77 3.32 4.31
1dqzA00 78.12 Antigen 85-CMycobacterium tuberculosis 3.40.50.1820 280 9 75 3.37 4.46
1orvA02 77.00 Sus scrofaDipeptidyl peptidase 4Dipeptidyl-peptidase 4 [EC:3.4.14.5] 3.40.50.1820 258 10 74 3.44 4.59
1auoA00 76.68 Carboxylesterase 2Pseudomonas fluorescens 3.40.50.1820 218 12 66 2.81 4.25
1ufoA00 76.61 HydrolaseThermus thermophilus 3.40.50.1820 234 13 68 3.08 4.52
1fj2A00 75.86 Glycerophospholipid metabolismHomo sapiensAcyl-protein thioesterase 1Lysophospholipase I [EC:3.1.1.5]Lysophospholipase activity 3.40.50.1820 229 12 69 3.29 4.70
2o2gA00 74.96 Dienelactone hydrolaseAnabaena variabilis ATCC 29413 3.40.50.1820 210 11 68 3.25 4.77
1imjA00 74.80 Abhydrolase domain-containing protein 14BHomo sapiensAbhydrolase domain-containing protein 14 3.40.50.1820 208 13 68 3.00 4.40
1j1iA00 74.50 Meta cleavage compound hydrolaseJanthinobacterium sp. J3 3.40.50.1820 258 10 65 2.65 4.08
3bdiA00 73.99 Putative uncharacterized protein Ta0194Thermoplasma acidophilum 3.40.50.1820 199 10 64 2.88 4.45
3e0xA00 72.47 Lipase-esterase related proteinClostridium acetobutylicum 3.40.50.1820 223 8 57 2.82 4.90
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Displaying entries 1 to 12 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1gklA00
SFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQN
ILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWY
VMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQIEAMKALPHFDYTSD
FSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHELEHHHHHH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1gklA00
MASDKFPVAENPSSSFKYESAVQYRPAPDSYLNPCPQAGRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGE
NENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHR
GFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQI
EAMKALPHFDYTSDFSKGNFYFLVAPGATHWWGYVRHYIYDALPYFFHELEHHHHHH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:44

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"