CATH Domain: 1g8mB02 XML data for domain: 1g8mB02

Molscript image for 1g8mB02
1g8mB02
PDB coordinates for domain 1g8mB02

PDB 1g8m, Chain B, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.140 Cytidine Deaminase; domain 2
3.40.140.20 Gene3D
3.40.140.20.1
3.40.140.20.1.1
3.40.140.20.1.1.1
3.40.140.20.1.1.1.1
3.40.140.20.1.1.1.1.1

[top]
Segment boundaries for domain 1g8mB02

Chopping figure for domain 1g8mB02
DomainStart PDB ResidueStop PDB Residue
1g8mB01 478 519
1g8mB02 375 476
1g8mB02 520 583
1g8mB03 228 374
1g8mB04 4 190

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.140.20.1.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1thzA03 81.06 One carbon pool by folatePurine metabolismProtein homodimerization activityBifunctional purine biosynthesis protein PURHGallus gallus 3.40.140.20 147 9 67 2.22 3.27
[1]
Displaying entries 1 to 1 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1g8mB02
DDNEIRTLYGLQLQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHC
TRLAGDKANSWWLRHHPRVLSLTEAEKKQWIAKLTAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNE
LGITL
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1g8mB02
DDNEIRTLYGLQLXQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIH
CTRLAGDKANSWWLRHHPRVLSLTEAEKKQWIAKLTAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACN
ELGITL
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:37

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"