CATH Domain: 1g8mA01 XML data for domain: 1g8mA01

Molscript image for 1g8mA01
1g8mA01
PDB coordinates for domain 1g8mA01

PDB 1g8m, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.287 Helix Hairpins
1.10.287.440 Gene3D
1.10.287.440.1
1.10.287.440.1.1
1.10.287.440.1.1.1
1.10.287.440.1.1.1.1
1.10.287.440.1.1.1.1.1

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Segment boundaries for domain 1g8mA01

Chopping figure for domain 1g8mA01
DomainStart PDB ResidueStop PDB Residue
1g8mA01 478 519
1g8mA02 375 476
1g8mA02 520 593
1g8mA03 228 374
1g8mA04 4 190

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.10.287.440.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gv2A02 79.82 Transcriptional activator MybNucleusEmbryonic digestive tract developmentProtein bindingMus musculus 1.10.10.60 46 4 82 3.70 4.48
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1g8mA01
KFKAGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAFEEVPAQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1g8mA01
KFKAGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAXFEEVPAQ
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:37

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"