CATH Domain: 1g8kB00 XML data for domain: 1g8kB00

Molscript image for 1g8kB00
1g8kB00
PDB coordinates for domain 1g8kB00

PDB 1g8k, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.102 3-layer Sandwich
2.102.10 Rieske Iron-sulfur Protein
2.102.10.10 'Rieske'-like iron-sulphur domains Gene3D
2.102.10.10.3
2.102.10.10.3.1
2.102.10.10.3.1.1
2.102.10.10.3.1.1.1
2.102.10.10.3.1.1.1.1

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Segment boundaries for domain 1g8kB00

Chopping figure for domain 1g8kB00
DomainStart PDB ResidueStop PDB Residue
1g8kB00 1 133

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 2.102.10.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1jm1A00 83.09 Sulfolobus acidocaldariusConserved Archaeal Rieske domain protein 2.102.10.10 202 28 65 2.66 4.04
1nykA00 82.49 Rieske iron-sulfur proteinThermus thermophilus 2.102.10.10 156 19 79 3.97 4.99
1rfsA00 82.36 Cytochrome b6-f complex iron-sulfur subunit, chloroplasticSpinacia oleracea 2.102.10.10 127 16 79 3.08 3.86
1fqtA00 81.82 Biphenyl degradationBiphenyl 2,3-dioxygenase [EC:1.14.12.18]Biphenyl dioxygenase system ferredoxin subunitBurkholderia xenovorans LB400Metabolic pathways 2.102.10.10 109 11 78 3.15 3.99
3gceA00 81.78 Nocardioides aromaticivoransFerredoxin component of carbazole 1,9a-dioxygenase 2.102.10.10 104 18 75 2.94 3.87
1vm9A00 80.52 Pseudomonas mendocinaToluene-4-monooxygenase system ferredoxin subunit 2.102.10.10 109 15 81 3.11 3.83
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1g8kB00
RTTLAYPATAVSVAKNLAANEPVSFTYPDTSSPCVAVKLGAPVPGGVGPDDDIVAYSVLCTHMGCPTSYDSSSKTFSCPC
HFTEFDAEKAGQMICGEATADLPRVLLRYDAASDALTAVGVDGLIYGRQANVI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1g8kB00
RTTLAYPATAVSVAKNLAANEPVSFTYPDTSSPCVAVKLGAPVPGGVGPDDDIVAYSVLCTHMGCPTSYDSSSKTFSCPC
HFTEFDAEKAGQMICGEATADLPRVLLRYDAASDALTAVGVDGLIYGRQANVI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:10

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"