CATH Domain: 1g8aA02 XML data for domain: 1g8aA02

Molscript image for 1g8aA02
1g8aA02
PDB coordinates for domain 1g8aA02

PDB 1g8a, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.150 Vaccinia Virus protein VP39 Gene3D
3.40.50.150.25
3.40.50.150.25.1
3.40.50.150.25.1.1
3.40.50.150.25.1.1.1
3.40.50.150.25.1.1.1.1

Segment boundaries for domain 1g8aA02

Chopping figure for domain 1g8aA02
DomainStart PDB ResidueStop PDB Residue
1g8aA01 1 51
1g8aA02 52 227

Structural Neighbourhood (50 entries)

There are 50 matching structural neighberhood comparisons for CATH ID 3.40.50.150.25.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 50 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1i9gA02 83.15 POSSIBLE RNA METHYLTRANSFERASETRNA (adenine-N1-)-methyltransferase [EC:2.1.1.36]Mycobacterium tuberculosis 3.40.50.150 184 15 87 3.24 3.70
1ej0A00 82.95 Ribosomal RNA large subunit methyltransferase ERRNA (uridine-2'-O-)-methyltransferase activityEnzyme-directed rRNA 2'-O-methylationRibosomal RNA large subunit methyltransferase E [EC:2.1.1.-]Escherichia coli K-12 3.40.50.150 180 17 87 2.96 3.37
1m6yA01 82.13 Thermotoga maritimaS-adenosyl-methyltransferase [EC:2.1.1.-]S-adenosyl-L-methionine-dependent methyltransferase mraW 3.40.50.150 180 13 87 2.67 3.04
2yvlA02 81.44 TRNA (adenine-N1-)-methyltransferase [EC:2.1.1.36]Aquifex aeolicusPutative uncharacterized protein 3.40.50.150 189 14 82 3.55 4.30
1qamA01 81.34 Bacillus subtilisRRNA (adenine-N6-)-methyltransferase [EC:2.1.1.48]RRNA adenine N-6-methyltransferase 3.40.50.150 157 8 81 2.78 3.40
3bxoA01 80.98 Streptomyces venezuelaeN,N-dimethyltransferase 3.40.50.150 177 16 87 3.64 4.16
1ne2B00 80.80 Putative uncharacterized protein Ta1320Putative methylaseThermoplasma acidophilum 3.40.50.150 180 13 82 3.20 3.89
3c6kB03 80.72 Spermine synthaseArginine and proline metabolismSpermine synthase [EC:2.5.1.22]Glutathione metabolismMetabolic pathways 3.40.50.150 187 15 86 3.40 3.95
2fpoC00 80.60 Ribosomal RNA small subunit methyltransferase D [EC:2.1.1.52]RRNA (guanine-N2-)-methyltransferase activityRRNA base methylationProtein bindingEscherichia coli K-12 3.40.50.150 176 7 85 3.52 4.10
1l3iA00 80.56 Methanothermobacter thermautotrophicus str. Delta HPorphyrin and chlorophyll metabolismProbable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]Precorrin-8W decarboxylase [EC:1.-.-.-]Metabolic pathways 3.40.50.150 178 13 85 3.10 3.61
3cggA00 80.53 SAM-dependent methyltransferasesCorynebacterium glutamicum 3.40.50.150 184 11 83 3.90 4.69
1dusA00 80.34 Methanocaldococcus jannaschiiProtein MJ0882 3.40.50.150 192 11 76 2.38 3.11
2frnA02 80.08 3.40.50.150 185 15 81 3.19 3.91
2b3tA02 79.95 Methyltransferase [EC:2.1.1.-]Protein methyltransferase hemKProtein bindingEscherichia coli K-12 3.40.50.150 192 10 81 3.22 3.96
1xvaA02 79.57 S-adenosylhomocysteine metabolic processRattus norvegicusNucleusGlycine, serine and threonine metabolismGlycine N-methyltransferase activity 3.40.50.150 188 13 85 4.16 4.89
1dl5A01 79.51 Thermotoga maritimaProtein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]Protein-L-isoaspartate O-methyltransferase 3.40.50.150 201 16 67 3.06 4.52
3ftdA01 79.43 Dimethyladenosine transferase [EC:2.1.1.-]Ribosomal RNA small subunit methyltransferase AAquifex aeolicus 3.40.50.150 177 12 87 3.10 3.54
2fhpA00 79.37 Methylase, putativeEnterococcus faecalis 3.40.50.150 177 9 83 3.20 3.83
2p35A01 78.75 Trans-aconitate 2-methyltransferaseAgrobacterium tumefaciens str. C58Trans-aconitate 2-methyltransferase [EC:2.1.1.144] 3.40.50.150 161 13 81 4.02 4.91
2p8jA00 78.65 S-adenosylmethionine-dependent methyltransferaseClostridium acetobutylicum 3.40.50.150 200 14 77 3.51 4.56
1jsxA00 78.65 Glucose inhibited division protein B [EC:2.1.-.-]RRNA base methylationRibosomal RNA small subunit methyltransferase GEscherichia coli K-12RRNA (guanine-N7-)-methyltransferase activity 3.40.50.150 193 11 78 3.51 4.49
1dctA01 78.65 Modification methylase HaeIIIHaemophilus aegyptius 3.40.50.150 173 9 76 3.05 4.01
2ozvA01 78.54 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.150 190 13 77 3.36 4.34
1f3lA01 78.11 Rattus norvegicusProtein arginine N-methyltransferase 3 [EC:2.1.1.-]Protein arginine N-methyltransferase 3Peptidyl-arginine methylation, to asymmetrical-dimethyl arginineProtein-arginine omega-N asymmetric methyltransferase activity 3.40.50.150 143 18 67 3.32 4.91
2py6A03 78.08 Methylobacillus flagellatus KTMethyltransferase FkbM 3.40.50.150 177 7 87 3.39 3.90
3cvoA00 77.23 Ruegeria pomeroyiPutative uncharacterized protein 3.40.50.150 186 8 75 3.34 4.41
3ccfA00 77.23 Cyclopropane-fatty-acyl-phospholipid synthaseTrans-aconitate 2-methyltransferase [EC:2.1.1.144]Anabaena variabilis ATCC 29413 3.40.50.150 232 13 64 2.81 4.35
1pl8A02 77.18 Membrane fractionZinc ion bindingL-iditol 2-dehydrogenase [EC:1.1.1.14]Sorbitol catabolic processGlucose metabolic process 3.40.50.720 139 12 72 3.39 4.70
2efjA02 77.01 Coffea canephora3,7-dimethylxanthine methyltransferase 3.40.50.150 211 14 78 3.93 5.00
1dpgA01 77.01 Glucose-6-phosphate 1-dehydrogenaseLeuconostoc mesenteroides 3.40.50.720 175 10 77 3.67 4.75
1af7A02 76.98 Bacterial chemotaxisTwo-component systemChemotaxis protein methyltransferase CheR [EC:2.1.1.80]Salmonella enterica subsp. enterica serovar TyphimuriumChemotaxis protein methyltransferase 3.40.50.150 194 9 71 3.39 4.73
3c3pA00 76.91 Geobacter sulfurreducensPutative uncharacterized protein 3.40.50.150 178 10 82 4.09 4.99
2qm3A02 76.90 Pyrococcus furiosusPutative uncharacterized protein 3.40.50.150 222 12 73 3.49 4.72
1nytA02 76.54 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysShikimate 5-dehydrogenase [EC:1.1.1.25]Shikimate dehydrogenaseProtein binding 3.40.50.720 143 11 77 3.53 4.57
1vlmA00 76.47 Thermotoga maritimaPutative uncharacterized protein 3.40.50.150 202 13 70 3.12 4.41
1g55A02 76.31 DNA (cytosine-5-)-methyltransferase activityCysteine and methionine metabolismDNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]Homo sapiensTRNA (cytosine-5-)-methyltransferase 3.40.50.150 180 7 77 3.71 4.77
2a4kB01 76.25 3.40.50.720 196 12 62 2.74 4.37
1nv8A02 76.16 Thermotoga maritimaMethyltransferase [EC:2.1.1.-]HemK protein 3.40.50.150 197 10 76 3.73 4.87
1nw3A02 76.05 Histone-lysine N-methyltransferase, H3 lysine-79 specificHomo sapiens 3.40.50.150 192 14 77 3.49 4.50
1lluA02 76.01 Tyrosine metabolismFatty acid metabolism1- and 2-Methylnaphthalene degradationMetabolic pathwaysMetabolism of xenobiotics by cytochrome P450 3.40.50.720 138 8 73 3.58 4.88
1vbfA00 75.71 Protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]Sulfolobus tokodaiiPutative uncharacterized protein ST1123 3.40.50.150 220 15 55 2.66 4.76
2aefA01 75.70 Methanothermobacter thermautotrophicus str. Delta HCalcium-gated potassium channel mthK 3.40.50.720 115 6 63 2.80 4.44
1h2bA02 75.54 Tyrosine metabolismFatty acid metabolism1- and 2-Methylnaphthalene degradationMetabolic pathwaysAeropyrum pernix 3.40.50.720 140 12 72 3.55 4.88
1vi2A02 75.43 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysQuinate/shikimate dehydrogenaseQuinate/shikimate dehydrogenase [EC:1.1.1.282]Shikimate 5-dehydrogenase activity 3.40.50.720 147 7 75 3.66 4.84
1uirA02 74.99 Arginine and proline metabolismGlutathione metabolismMetabolic pathwaysCysteine and methionine metabolismBeta-Alanine metabolism 3.40.50.150 253 13 64 3.19 4.98
2eggA02 74.78 Shikimate 5-dehydrogenase [EC:1.1.1.25]Geobacillus kaustophilusPhenylalanine, tyrosine and tryptophan biosynthesisShikimate 5-dehydrogenaseMetabolic pathways 3.40.50.720 140 12 73 3.63 4.91
1ur5C01 74.72 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismChloroflexus aurantiacus J-10-flMetabolic pathways 3.40.50.720 136 11 64 2.92 4.51
1o6zA02 74.63 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismHaloarcula marismortuiMetabolic pathways 3.40.50.720 142 7 64 3.19 4.97
1l1eB00 74.55 Cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]MYCOLIC ACID SYNTHASE PCAA (CYCLOPROPANE SYNTHASE)Mycobacterium tuberculosis 3.40.50.150 260 14 59 2.85 4.78
3hhpA01 74.00 Citrate cycle (TCA cycle)Pyruvate metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysMalate dehydrogenase [EC:1.1.1.37] 3.40.50.720 138 11 65 2.96 4.49
Displaying entries 1 to 50 (page 1 of 1)


Domain ATOM Sequence

>pdb|1g8aA02
NPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA
TKPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEYFEVIERLN
LEPYEKDHALFVVRKT    

Domain COMBS Sequence

>pdb|1g8aA02
NPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA
TKPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEYFEVIERLN
LEPYEKDHALFVVRKT    

Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:21

Cut based on decision in database "DomChop" on "cathdb"