CATH Domain: 1g87A02 XML data for domain: 1g87A02

Molscript image for 1g87A02
1g87A02
PDB coordinates for domain 1g87A02

PDB 1g87, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.710 Gene3D
2.60.40.710.1
2.60.40.710.1.1
2.60.40.710.1.1.1
2.60.40.710.1.1.1.1
2.60.40.710.1.1.1.1.1

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Segment boundaries for domain 1g87A02

Chopping figure for domain 1g87A02
DomainStart PDB ResidueStop PDB Residue
1g87A01 3 450
1g87A02 454 613

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.60.40.710.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1nbcA00 84.58 Clostridium thermocellum ATCC 27405Cellulosomal-scaffolding protein AProtein binding 2.60.40.710 155 18 85 2.52 2.95
2pr9A02 76.21 Huntington's diseaseEndocytosisRattus norvegicusClathrin vesicle coatAP-2 complex subunit mu-1 2.60.40.1170 112 9 69 3.25 4.66
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1g87A02
ITNDEVIIKAGLNSTGPNYTEIKAVVYNQTGWPARVTDKISFKYFMDLSEIVAAGIDPLSLVTSSYSEGKNTKVSGVLPW
DVSNNVYYVNVDLTGENIYPGGQSACRREVQFRIAAPQGTTYWNPKNDFSYDGLPTTSTVNTVTNIPVYDNGVKVFGNE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1g87A02
ITNDEVIIKAGLNSTGPNYTEIKAVVYNQTGWPARVTDKISFKYFMDLSEIVAAGIDPLSLVTSSNYSEGKNTKVSGVLP
WDVSNNVYYVNVDLTGENIYPGGQSACRREVQFRIAAPQGTTYWNPKNDFSYDGLPTTSTVNTVTNIPVYDNGVKVFGNE
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:37

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"