CATH Domain: 1g7sA02 XML data for domain: 1g7sA02

Molscript image for 1g7sA02
1g7sA02
PDB coordinates for domain 1g7sA02

PDB 1g7s, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.30 Elongation Factor Tu (Ef-tu); domain 3
2.40.30.10 Translation factors Gene3D
2.40.30.10.13
2.40.30.10.13.1
2.40.30.10.13.1.1
2.40.30.10.13.1.1.1
2.40.30.10.13.1.1.1.1

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Segment boundaries for domain 1g7sA02

Chopping figure for domain 1g7sA02
DomainStart PDB ResidueStop PDB Residue
1g7sA01 1 225
1g7sA02 226 337
1g7sA03 351 431
1g7sA04 462 550

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 2.40.30.10.13.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2bm0A02 86.44 Elongation factor GElongation factor EF-G [EC:3.6.5.3]Thermus thermophilus 2.40.30.10 103 14 87 2.27 2.61
1r5bA02 86.27 Eukaryotic peptide chain release factor GTP-binding subunitProtein heterodimerization activityTranslation release factor activityPeptide chain release factor eRF subunit 2Schizosaccharomyces pombe 2.40.30.10 89 13 81 1.80 2.21
1wb1B02 83.49 Methanococcus maripaludisMJ0495-like protein 2.40.30.10 92 19 83 2.52 3.02
1g7sA04 81.65 Methanothermobacter thermautotrophicus str. Delta HTranslation initiation factor IF-2 unclassified subunitProbable translation initiation factor IF-2 2.40.30.10 89 8 77 3.11 4.00
1aipE02 81.51 Elongation factor Tu-AElongation factor EF-Tu [EC:3.6.5.3]Thermus thermophilus 2.40.30.10 130 14 74 2.67 3.58
1n0uA02 79.00 Positive regulation of translational elongationElongation factor 2Elongation factor EF-2 [EC:3.6.5.3]Ribonucleoprotein bindingProtein binding 2.40.30.10 148 7 66 2.77 4.18
2greF02 74.68 Aminopeptidase [EC:3.4.11.-]Deblocking aminopeptidaseBacillus cereus ATCC 14579 2.40.30.40 75 12 58 2.83 4.85
3cpxA02 72.82 Aminopeptidase, M42 familyCytophaga hutchinsonii ATCC 33406 2.40.30.40 61 6 55 2.58 4.64
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1g7sA02
IEEDSPARGTILEVKEETGLGMTIDAVIYDGILRKDDTIAMMTSKDVISTRIRSLLKPRPLESRKKFQKVDEVVAAAGIK
IVAPGIDDVMAGSPLRVVTDPEKVREEI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1g7sA02
IEEDSPARGTILEVKEETGLGMTIDAVIYDGILRKDDTIAMMTSKDVISTRIRSLLKPRPLEEMRESRKKFQKVDEVVAA
AGIKIVAPGIDDVMAGSPLRVVTDPEKVREEI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:37

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"