CATH Domain: 1g60B00 XML data for domain: 1g60B00

Molscript image for 1g60B00
1g60B00
PDB coordinates for domain 1g60B00

PDB 1g60, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.150 Vaccinia Virus protein VP39 Gene3D
3.40.50.150.17
3.40.50.150.17.1
3.40.50.150.17.1.1
3.40.50.150.17.1.1.1
3.40.50.150.17.1.1.1.1

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Segment boundaries for domain 1g60B00

Chopping figure for domain 1g60B00
DomainStart PDB ResidueStop PDB Residue
1g60B00 1 256

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.50.150.17.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1eg2A00 85.24 Rhodobacter sphaeroidesModification methylase RsrI 3.40.50.150 270 32 82 4.13 4.98
1booA00 83.19 Proteus vulgarisModification methylase PvuII 3.40.50.150 282 20 74 3.12 4.17
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1g60B00
MLEINKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPFNCA
FICQYLVSKGMIFQNWITWDKRDGMGSAKRRFSTGQETILFFSKSKNHTFNYDEVRVPYGILKNGKRWFPNPNGRLCGEV
WHFSSITPKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1g60B00
MLEINKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPFNCA
FICQYLVSKGMIFQNWITWDKRDGMGSAKRRFSTGQETILFFSKSKNHTFNYDEVRVPYESTDRIKHASEKGILKNGKRW
FPNPNGRLCGEVWHFSSQRHKEKVNGKTVKLTHITPKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGC
DMNAEYVNQANFVLNQLEIN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:12

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:12

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:34

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"