CATH Domain: 1g2oA00 XML data for domain: 1g2oA00

Molscript image for 1g2oA00
1g2oA00
PDB coordinates for domain 1g2oA00

PDB 1g2o, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1580 Gene3D
3.40.50.1580.6
3.40.50.1580.6.1
3.40.50.1580.6.1.1
3.40.50.1580.6.1.1.1
3.40.50.1580.6.1.1.1.1

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Segment boundaries for domain 1g2oA00

Chopping figure for domain 1g2oA00
DomainStart PDB ResidueStop PDB Residue
1g2oA00 7 268

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.50.1580.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1zosA00 80.19 Cysteine and methionine metabolismMetabolic pathwaysS-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9]5'-methylthioadenosine / S-adenosylhomocysteine nucleosidaseStreptococcus pneumoniae R6 3.40.50.1580 230 13 82 3.88 4.73
3emvA01 80.11 Pyrimidine metabolismUridine phosphorylase, putativePlasmodium vivaxUridine phosphorylase [EC:2.4.2.3]Metabolic pathways 3.40.50.1580 241 9 86 3.56 4.13
1je0C00 80.04 S-methyl-5'-thioadenosine phosphorylase5'-methylthioadenosine phosphorylase [EC:2.4.2.28]Cysteine and methionine metabolismSulfolobus solfataricusMetabolic pathways 3.40.50.1580 227 9 83 3.52 4.19
3bjeA01 75.90 [EC:2.4.2.-]Nucleoside phosphorylase, putativeTrypanosoma brucei 3.40.50.1580 309 8 71 3.46 4.82
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1g2oA00
DPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLA
GRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNLTARSPLVGGEFVDLTDAYSPRLRE
LARQSDPQLAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGITGEPLSHAEV
LAAGAASATRMGALLADVIARF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1g2oA00
MADPRPDPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAH
RVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNLTARSPLVGGEFVDLTDAY
SPRLRELARQSDPQLAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGITGEP
LSHAEVLAAGAASATRMGALLADVIARF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:20

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:20

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:43

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"