CATH Domain: 1g29103 XML data for domain: 1g29103

Molscript image for 1g29103
1g29103
PDB coordinates for domain 1g29103

PDB 1g29, Chain 1, Domain 3

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.50 OB fold (Dihydrolipoamide Acetyltransferase, E2P)
2.40.50.100 Gene3D
2.40.50.100.9
2.40.50.100.9.1
2.40.50.100.9.1.1
2.40.50.100.9.1.1.1
2.40.50.100.9.1.1.1.1

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Segment boundaries for domain 1g29103

Chopping figure for domain 1g29103
DomainStart PDB ResidueStop PDB Residue
1g29101 1 244
1g29102 310 354
1g29103 245 292
1g29103 356 372

Structural Neighbourhood (19 entries)

There are 19 matching structural neighberhood comparisons for CATH ID 2.40.50.100.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 19 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2awnB02 87.88 ABC transportersMaltooligosaccharide-importing ATPase activityMaltose/maltodextrin import ATP-binding protein MalKMaltose transportMaltose/maltodextrin transport system ATP-binding protein [EC:3.6.3.19] 2.40.50.100 66 30 89 2.31 2.58
1bcoA02 82.43 TransposaseEnterobacteria phage Mu 2.30.30.130 68 12 83 2.82 3.36
1oxxK03 81.61 ABC transporter, ATP binding protein (Glucose)Glucose/arabinose transport system ATP-binding proteinSulfolobus solfataricusABC transporters 2.40.50.100 45 37 69 2.27 3.28
1uebA02 81.38 Thermus thermophilus HB8Elongation factor EF-PElongation factor P 2.40.50.140 63 6 86 3.13 3.63
3d31A02 80.09 Methanosarcina acetivoransPutative sulfate transport system ATP-binding proteinSulfate/molybdate ABC transporter, ATP-binding proteinABC transporters 2.40.50.140 46 19 64 2.23 3.45
2r7dA03 79.44 Exoribonuclease II [EC:3.1.13.1]Ribonuclease II family proteinDeinococcus radiodurans 2.40.50.140 59 10 76 3.49 4.54
1bkbA02 79.25 Pyrobaculum aerophilumTranslation initiation factor 5A 2.40.50.140 62 9 87 4.02 4.58
1k3rA02 78.98 Hypothetical proteinMethanothermobacter thermautotrophicus str. Delta HConserved protein 2.40.50.140 59 16 76 3.57 4.64
2p5zX04 78.82 Escherichia coli O6Putative uncharacterized protein 2.40.50.230 65 16 70 3.32 4.69
1cukA01 78.18 Homologous recombinationHolliday junction ATP-dependent DNA helicase ruvAHolliday junction DNA helicase RuvAEscherichia coli K-12 2.40.50.140 66 12 80 3.79 4.72
3cp0A00 77.81 Corynebacterium glutamicumMembrane protein implicated in regulation of membrane protease activity 2.40.50.140 62 14 78 3.64 4.64
1a62A02 77.77 RNA degradationTranscriptional attenuationTranscription termination factor RhoProtein bindingEscherichia coli K-12 2.40.50.140 70 15 77 3.30 4.28
3d0fA01 77.20 MrcA; penicillin-binding 1 (Peptidoglycan synthetase) transmembrane proteinPenicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]Peptidoglycan biosynthesisNitrosomonas europaeaMetabolic pathways 2.40.50.140 67 6 83 3.79 4.53
1ty0A02 76.37 Streptococcus pyogenesExotoxin J 2.40.50.110 75 6 74 3.22 4.31
1g29102 76.34 Maltose transport protein MalKThermococcus litoralis 2.40.50.140 45 13 56 2.46 4.32
1uebA03 75.77 Thermus thermophilus HB8Elongation factor EF-PElongation factor P 2.40.50.140 58 5 66 2.59 3.92
3d31A03 74.82 Methanosarcina acetivoransPutative sulfate transport system ATP-binding proteinSulfate/molybdate ABC transporter, ATP-binding proteinABC transporters 2.40.50.100 71 15 66 3.17 4.79
1pfsA00 74.80 DNA-Binding protein G5PPseudomonas phage Pf3 2.40.50.140 78 3 64 2.98 4.65
1enfA01 73.04 Staphylococcal enterotoxinEnterotoxin type HStaphylococcus aureus 2.40.50.110 78 4 71 3.32 4.62
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Displaying entries 1 to 19 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1g29103
MNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDMKKIHIFDKTTGKAIF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1g29103
MNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDMKKIHIFDKTTGKAIF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:30

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:30

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:36

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"