CATH Domain: 1fxoA00 XML data for domain: 1fxoA00

Molscript image for 1fxoA00
1fxoA00
PDB coordinates for domain 1fxoA00

PDB 1fxo, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.550 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A Gene3D
3.90.550.10.4
3.90.550.10.4.1
3.90.550.10.4.1.1
3.90.550.10.4.1.1.1
3.90.550.10.4.1.1.1.1

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Segment boundaries for domain 1fxoA00

Chopping figure for domain 1fxoA00
DomainStart PDB ResidueStop PDB Residue
1fxoA00 2 293

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.90.550.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1hm9A01 81.22 Amino sugar and nucleotide sugar metabolismBifunctional protein glmUBifunctional protein GlmU [EC:2.7.7.23 2.3.1.157]Metabolic pathwaysStreptococcus pneumoniae 3.90.550.10 246 17 80 2.93 3.64
1jykA00 77.16 LicC proteinStreptococcus pneumoniae 3.90.550.10 227 18 74 3.10 4.15
1vicA00 76.47 Haemophilus influenzae3-deoxy-manno-octulosonate cytidylyltransferase3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]Lipopolysaccharide biosynthesisMetabolic pathways 3.90.550.10 255 12 73 3.60 4.87
1eziA00 74.51 Amino sugar and nucleotide sugar metabolismMetabolic pathwaysN-acylneuraminate cytidylyltransferaseN-acylneuraminate cytidylyltransferase [EC:2.7.7.43]Neisseria meningitidis 3.90.550.10 211 10 59 2.92 4.90
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1fxoA00
KRKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSNWGLDLQYAV
QPSPDGLAQAFLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVLDPERYGVVEFDQGGKAISLEE
KPLEPKSNYAVTGLYFYDQQVVDIARDLKPSPRGELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIAT
LENRQGLKVACPEEIAYRQKWIDAAQLEKLAAPLAKNGYGQYLKRLLTETVY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1fxoA00
MKRKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSNWGLDLQYA
VQPSPDGLAQAFLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVLDPERYGVVEFDQGGKAISLE
EKPLEPKSNYAVTGLYFYDQQVVDIARDLKPSPRGELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIA
TLENRQGLKVACPEEIAYRQKWIDAAQLEKLAAPLAKNGYGQYLKRLLTETVY
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:35

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:35

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:58

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"