CATH Domain: 1fs0E02 XML data for domain: 1fs0E02

Molscript image for 1fs0E02
1fs0E02
PDB coordinates for domain 1fs0E02

PDB 1fs0, Chain E, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.5 Single alpha-helices involved in coiled-coils or other helix-helix interfaces
1.20.5.440 Gene3D
1.20.5.440.5
1.20.5.440.5.1
1.20.5.440.5.1.1
1.20.5.440.5.1.1.1
1.20.5.440.5.1.1.1.1

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Segment boundaries for domain 1fs0E02

Chopping figure for domain 1fs0E02
DomainStart PDB ResidueStop PDB Residue
1fs0E01 2 89
1fs0E02 90 133

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 1.20.5.440.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ow6A01 81.55 Focal adhesion kinase 1Focal adhesionCytoskeletonIntegrin-mediated signaling pathwayHomo sapiens 1.20.5.540 30 6 65 3.24 4.92
1ozhA03 80.96 Acetolactate synthase, catabolicKlebsiella pneumoniae 1.20.5.740 24 16 55 1.38 2.50
1qexA01 80.45 Enterobacteria phage T4Baseplate structural protein Gp9 1.20.5.960 35 0 60 1.87 3.09
2p10B02 79.98 Mesorhizobium lotiMll9387 protein 1.20.5.460 26 3 57 1.74 3.01
1h8bB00 79.79 TitinOryctolagus cuniculus 1.20.5.510 23 34 57 1.96 3.39
1fdoA05 79.55 Methane metabolismMetabolic pathwaysGlyoxylate and dicarboxylate metabolismFormate dehydrogenase HFormate dehydrogenase, alpha subunit [EC:1.2.1.2] 1.20.5.460 27 11 52 1.51 2.87
1hj0A00 78.37 Bos taurusThymosin beta-10 1.20.5.520 41 10 53 2.07 3.86
1ik7A00 75.19 Regulation of proteolysisProtein domain specific bindingHemocyte proliferationPlasma membraneZygotic specification of dorsal/ventral axis 1.20.5.530 52 5 42 1.25 2.95
2qiwA02 71.08 Corynebacterium glutamicumPEP phosphonomutase and related enzymes 1.20.5.510 18 11 42 1.74 4.13
1l2pA00 69.57 Oxidative phosphorylationMetabolic pathwaysATP synthesis coupled proton transportAnchored to membraneF-type H+-transporting ATPase subunit b [EC:3.6.3.14] 1.20.5.620 61 13 29 0.29 0.98
1m8oB00 69.21 Positive regulation of endothelial cell migrationPlatelet-derived growth factor receptor bindingPositive regulation of endothelial cell proliferationActivation of protein kinase activityRegulation of bone resorption 1.20.5.630 47 5 42 1.45 3.41
3c8vA04 68.00 Desulfovibrio desulfuricans subsp. desulfuricans str. G20Putative uncharacterized protein 1.20.5.510 19 0 34 0.52 1.52
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Displaying entries 1 to 12 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1fs0E02
DEARAMEAKRKAEEHDVDYAQASAELAKAIAQLRVIEL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1fs0E02
DEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIEL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:17

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:17

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:34

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"