CATH Domain: 1fp2A02 XML data for domain: 1fp2A02

Molscript image for 1fp2A02
1fp2A02
PDB coordinates for domain 1fp2A02

PDB 1fp2, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.150 Vaccinia Virus protein VP39 Gene3D
3.40.50.150.14
3.40.50.150.14.1
3.40.50.150.14.1.1
3.40.50.150.14.1.1.1
3.40.50.150.14.1.1.1.1

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Segment boundaries for domain 1fp2A02

Chopping figure for domain 1fp2A02
DomainStart PDB ResidueStop PDB Residue
1fp2A01 8 103
1fp2A02 104 352

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.50.150.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1fp1D02 86.76 Medicago sativaIsoliquiritigenin 2'-O-methyltransferase 3.40.50.150 235 30 93 2.57 2.76
2r3sA03 81.28 3.40.50.150 202 17 77 3.15 4.06
1vlmA00 76.56 Thermotoga maritimaPutative uncharacterized protein 3.40.50.150 202 14 69 2.99 4.30
2efjA02 76.21 Coffea canephora3,7-dimethylxanthine methyltransferase 3.40.50.150 211 12 63 2.82 4.44
1xvaA02 74.37 S-adenosylhomocysteine metabolic processRattus norvegicusNucleusGlycine, serine and threonine metabolismGlycine N-methyltransferase activity 3.40.50.150 188 10 59 2.82 4.71
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1fp2A02
VRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCD
FVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKD
CLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTG
FLSLIEIYP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1fp2A02
VRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCD
FVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKD
CLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTG
FLSLIEIYP
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 20 Jul 2007 15:43

Assigning to "3.40.50.150" based on similarity with "1fpxA02"

Flow stage update by auto on 14 Mar 2007 15:07

No in_process hits for Domain "1fp2A02" ready to be processed

Flow stage update by auto on 14 Mar 2007 15:05

NW result present for Domain "1fp2A02"

Flow stage update by auto on 14 Mar 2007 15:01

All required files are present for Domain "1fp2A02"

Flow stage update by auto on 14 Mar 2007 14:59

Beginning processing for Domain "1fp2A02"

Insertion by cuff on 13 Dec 2006 16:18

nice batch of choppings