CATH Domain: 1fmbA00 XML data for domain: 1fmbA00

Molscript image for 1fmbA00
1fmbA00
PDB coordinates for domain 1fmbA00

PDB 1fmb, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.70 Cathepsin D, subunit A; domain 1
2.40.70.10 Acid Proteases Gene3D
2.40.70.10.18
2.40.70.10.18.1
2.40.70.10.18.1.1
2.40.70.10.18.1.1.1
2.40.70.10.18.1.1.1.1

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Segment boundaries for domain 1fmbA00

Chopping figure for domain 1fmbA00
DomainStart PDB ResidueStop PDB Residue
1fmbA00 1 104

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1fmbA00
VTYNLEKRPTTIVLINDTPLNVLLDTGADTSVLTTAHYNRLKYRGRKYQGTGIGGVGGNVETFSTPVTIKKKGRHIKTRM
LVADIPVTILGRDILQDLGAKLVL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1fmbA00
VTYNLEKRPTTIVLINDTPLNVLLDTGADTSVLTTAHYNRLKYRGRKYQGTGIGGVGGNVETFSTPVTIKKKGRHIKTRM
LVADIPVTILGRDILQDLGAKLVL
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1fmb000" to "1fmbA00" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 18:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:53

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"