CATH Domain: 1feuA01 XML data for domain: 1feuA01

Molscript image for 1feuA01
1feuA01
PDB coordinates for domain 1feuA01

PDB 1feu, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.240 Ribosomal Protein L25; Chain P
2.40.240.10 Ribosomal Protein L25; Chain P Gene3D
2.40.240.10.3
2.40.240.10.3.1
2.40.240.10.3.1.1
2.40.240.10.3.1.1.1
2.40.240.10.3.1.1.1.1

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Segment boundaries for domain 1feuA01

Chopping figure for domain 1feuA01
DomainStart PDB ResidueStop PDB Residue
1feuA01 1 91
1feuA02 92 185

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.40.240.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1v6zA01 76.85 Thermus thermophilus HB27Ribosomal RNA small subunit methyltransferase E [EC:2.1.1.-]Hypothetical conserved protein 2.40.240.20 65 12 62 2.83 4.52
1qtqA01 76.63 Aminoacyl-tRNA biosynthesisMetabolic pathwaysGlutaminyl-tRNA synthetaseGlutamine-tRNA ligase activityGlutaminyl-tRNA aminoacylation 2.40.240.10 107 6 58 2.47 4.20
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1feuA01
MEYRLKAYYREGEKPSALRRAGKLPGLMYNRHLNRKVYVDLVEFDKVFRQASIHHVIVLELPDGQSLPTLVRQVNLDKRR
RRPEHVDFFVL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1feuA01
MEYRLKAYYREGEKPSALRRAGKLPGLMYNRHLNRKVYVDLVEFDKVFRQASIHHVIVLELPDGQSLPTLVRQVNLDKRR
RRPEHVDFFVL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:34

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:34

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:32

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"