CATH Domain: 1fc4A02 XML data for domain: 1fc4A02

Molscript image for 1fc4A02
1fc4A02
PDB coordinates for domain 1fc4A02

PDB 1fc4, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.1150 Aspartate Aminotransferase, domain 1
3.90.1150.10 Aspartate Aminotransferase, domain 1 Gene3D
3.90.1150.10.19
3.90.1150.10.19.1
3.90.1150.10.19.1.1
3.90.1150.10.19.1.1.1
3.90.1150.10.19.1.1.1.1

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Segment boundaries for domain 1fc4A02

Chopping figure for domain 1fc4A02
DomainStart PDB ResidueStop PDB Residue
1fc4A01 58 295
1fc4A02 20 53
1fc4A02 296 397

Structural Neighbourhood (16 entries)

There are 16 matching structural neighberhood comparisons for CATH ID 3.90.1150.10.19.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 16 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1m32A01 83.93 2-aminoethylphosphonate--pyruvate transaminaseSalmonella enterica subsp. enterica serovar Typhimurium2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]Phosphonate and phosphinate metabolismMetabolic pathways 3.90.1150.10 110 15 73 2.76 3.75
1jg8A02 83.21 Thermotoga maritimaThreonine aldolase [EC:4.1.2.5]Glycine, serine and threonine metabolismMetabolic pathwaysL-allo-threonine aldolase 3.90.1150.10 96 14 67 2.37 3.50
2oatA01 83.00 Ornithine--oxo-acid transaminase [EC:2.6.1.13]Arginine and proline metabolismOrnithine-oxo-acid transaminase activityVisual perceptionHomo sapiens 3.90.1150.10 154 9 79 3.19 4.03
1sffA01 82.74 Valine, leucine and isoleucine degradationPropanoate metabolismMetabolic pathwaysButanoate metabolismBeta-Alanine metabolism 3.90.1150.10 165 11 76 3.36 4.40
1p3wA01 82.39 Thiamine metabolismCysteine desulfurase activitySelenocysteine lyase activityCysteine desulfuraseIron-sulfur cluster assembly 3.90.1150.10 121 13 75 3.04 4.00
1ohvA01 82.16 Sus scrofaMitochondrial matrixSuccinate-semialdehyde dehydrogenase bindingProtein homodimerization activityPyridoxal phosphate binding 3.90.1150.10 166 8 74 3.70 4.99
1eg5B01 81.68 Thermotoga maritimaThiamine metabolismCysteine desulfurase [EC:2.8.1.7]Aminotransferase, class V 3.90.1150.10 106 16 69 2.93 4.24
3ffhA01 81.19 Tyrosine metabolismListeria innocuaHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismPhenylalanine metabolism 3.90.1150.10 131 8 81 3.18 3.92
3ftbA01 80.96 Tyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathwaysPhenylalanine metabolism 3.90.1150.10 112 12 77 2.82 3.64
3k40A03 80.75 Aromatic-L-amino-acid decarboxylase activityDopamine biosynthetic process from tyrosineAromatic-L-amino-acid decarboxylaseDevelopmental pigmentationSerotonin biosynthetic process from tryptophan 3.90.1150.10 99 13 67 2.96 4.37
2hoyA01 80.35 Porphyrin and chlorophyll metabolismGlutamate-1-semialdehyde 2,1-aminomutaseGlutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]Synechococcus elongatus PCC 6301Metabolic pathways 3.90.1150.10 178 15 67 2.56 3.80
3bv0A01 79.88 Biotin metabolismMetabolic pathwaysAdenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseMycobacterium tuberculosis 3.90.1150.10 151 12 79 3.75 4.72
1s0aA01 79.67 Biotin metabolismMetabolic pathwaysAdenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseEscherichia coli K-12 3.90.1150.10 158 15 77 3.46 4.44
1iugA01 79.30 Thermus thermophilusAspartate aminotransferase 3.90.1150.10 111 8 75 3.18 4.23
1uu2B01 78.74 Thermotoga maritimaTyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.90.1150.10 117 7 72 2.91 4.03
1tplA01 77.90 Citrobacter freundiiTyrosine phenol-lyase 3.90.1150.10 181 11 64 3.20 4.99
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Displaying entries 1 to 16 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1fc4A02
GLFKEERIITSAQQADITVADGSHVINFCANNYLSELRDRLWANARQFREQSAAGFTLAGADHAIIPVLGDAVVAQKFAR
ELQKEGIYVTGFFYPVVPKGQARIRTQSAAHTPEQITRAVEAFTRIGKQLGVI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1fc4A02
GLFKEERIITSAQQADITVADGSHVINFCANNYLSELRDRLWANARQFREQXSAAGFTLAGADHAIIPVXLGDAVVAQKF
ARELQKEGIYVTGFFYPVVPKGQARIRTQXSAAHTPEQITRAVEAFTRIGKQLGVI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:37

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:37

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:32

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"