CATH Domain: 1fafA00 XML data for domain: 1fafA00

Molscript image for 1fafA00
1fafA00
PDB coordinates for domain 1fafA00

PDB 1faf, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.287 Helix Hairpins
1.10.287.110 Gene3D
1.10.287.110.7
1.10.287.110.7.1
1.10.287.110.7.1.1
1.10.287.110.7.1.1.1
1.10.287.110.7.1.1.1.1

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Segment boundaries for domain 1fafA00

Chopping figure for domain 1fafA00
DomainStart PDB ResidueStop PDB Residue
1fafA00 1 79

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 1.10.287.110.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2nn4A00 78.42 Bacillus subtilisUncharacterized protein yqgQ 1.10.287.760 62 9 74 3.42 4.58
3csxA00 77.12 Cyanothece sp. ATCC 51142DUF683-containing protein 1.10.287.660 61 4 59 2.95 4.96
1tvkA03 72.45 Gap junctionTubulin alphaTubulin alpha-1D chainBos taurus 1.10.287.600 56 3 59 2.89 4.86
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1fafA00
MDRVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRMNLGGTGFQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1fafA00
MDRVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRMNLGGTGFQ
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:07

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:07

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:26

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"