CATH Domain: 1f8fA01 XML data for domain: 1f8fA01

Molscript image for 1f8fA01
1f8fA01
PDB coordinates for domain 1f8fA01

PDB 1f8f, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.180 Quinone Oxidoreductase; Chain A, domain 1
3.90.180.10 Medium-chain alcohol dehydrogenases, catalytic domain Gene3D
3.90.180.10.10
3.90.180.10.10.1
3.90.180.10.10.1.1
3.90.180.10.10.1.1.1
3.90.180.10.10.1.1.1.1

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Segment boundaries for domain 1f8fA01

Chopping figure for domain 1f8fA01
DomainStart PDB ResidueStop PDB Residue
1f8fA01 4 177
1f8fA01 315 371
1f8fA02 178 314

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.90.180.10.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lluA01 85.40 Tyrosine metabolismFatty acid metabolism1- and 2-Methylnaphthalene degradationMetabolic pathwaysMetabolism of xenobiotics by cytochrome P450 3.90.180.10 203 28 87 2.00 2.30
2xaaC01 84.73 Rhodococcus ruberSecondary alcohol dehydrogenase 3.90.180.10 208 26 88 2.24 2.52
1piwA01 83.76 NADP-dependent alcohol dehydrogenase 6Alcohol dehydrogenase (NADP+) activityAlcohol metabolic processHydroxymethylfurfural reductase (NADH) activitySoluble fraction 3.90.180.10 223 17 90 2.46 2.71
1yb5A01 81.52 Xenobiotic catabolic processNADPH bindingNADPH2:quinone reductase [EC:1.6.5.5]Visual perceptionHomo sapiens 3.90.180.10 156 23 66 1.67 2.52
1iz0A01 79.13 NADPH2:quinone reductase [EC:1.6.5.5]Probable quinone oxidoreductaseThermus thermophilus 3.90.180.10 138 18 60 1.62 2.70
1o89A01 78.18 Putative quinone oxidoreductase yhdHEscherichia coli K-12 3.90.180.10 153 14 66 3.10 4.65
1v3vA01 76.17 Cavia porcellusProstaglandin reductase 1 3.90.180.10 155 14 61 2.67 4.32
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1f8fA01
LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQV
GDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLG
PLGCGIQTVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFYAFDEINQAAIDSRKGITLKPIIKIA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1f8fA01
MSELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTE
LQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT
KDVPIELLGPLGCGIQTVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFYAFDEINQAAIDSRKGITLKPIIKIA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:33

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:33

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:31

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"