CATH Domain: 1f6kC00 XML data for domain: 1f6kC00

Molscript image for 1f6kC00
1f6kC00
PDB coordinates for domain 1f6kC00

PDB 1f6k, Chain C, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.70 Aldolase class I Gene3D
3.20.20.70.12
3.20.20.70.12.2
3.20.20.70.12.2.1
3.20.20.70.12.2.1.1
3.20.20.70.12.2.1.1.1

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Segment boundaries for domain 1f6kC00

Chopping figure for domain 1f6kC00
DomainStart PDB ResidueStop PDB Residue
1f6kC00 1 293

Structural Neighbourhood (13 entries)

There are 13 matching structural neighberhood comparisons for CATH ID 3.20.20.70.12.2.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 13 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1xxxB00 87.81 Metabolic pathwaysLysine biosynthesisDihydrodipicolinate synthase [EC:4.2.1.52]Dihydrodipicolinate synthaseMycobacterium tuberculosis 3.20.20.70 295 26 97 1.98 2.02
1w3iA00 87.30 2-keto-3-deoxy gluconate aldolaseSulfolobus solfataricus 3.20.20.70 293 21 95 2.42 2.54
3lerC00 86.96 Dihydrodipicolinate synthase [EC:4.2.1.52]Dihydrodipicolinate synthaseCampylobacter jejuniLysine biosynthesisMetabolic pathways 3.20.20.70 289 24 95 2.46 2.56
3e96A00 86.92 Dihydrodipicolinate synthase [EC:4.2.1.52]Bacillus clausii KSM-K16Dihydrodipicolinate synthaseMetabolic pathwaysLysine biosynthesis 3.20.20.70 296 19 96 2.25 2.33
2r8wA00 85.05 Dihydrodipicolinate synthase [EC:4.2.1.52]Agrobacterium tumefaciens str. C58Dihydrodipicolinate synthaseMetabolic pathwaysLysine biosynthesis 3.20.20.70 287 21 94 2.39 2.52
2hmcA00 82.71 Metabolic pathwaysLysine biosynthesisDihydrodipicolinate synthase [EC:4.2.1.52]Agrobacterium tumefaciens str. C58Dihydrodipicolinate synthase 3.20.20.70 303 20 94 3.31 3.52
1xi3A00 74.74 Pyrococcus furiosusThiamine metabolismThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 202 9 61 2.97 4.85
3lb0A00 74.72 3-dehydroquinate dehydratase I [EC:4.2.1.10]Phenylalanine, tyrosine and tryptophan biosynthesisSalmonella enterica subsp. enterica serovar Typhimurium3-dehydroquinate dehydrataseMetabolic pathways 3.20.20.70 259 8 67 3.19 4.71
1q6oB00 74.19 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 8 63 2.98 4.66
1wa3D00 73.90 Thermotoga maritimaArginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolism 3.20.20.70 203 7 61 2.88 4.67
2tpsB00 73.82 Thiamine metabolismBacillus subtilisThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 226 11 63 3.11 4.89
1wbhB00 73.58 Arginine and proline metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysPentose and glucuronate interconversionsPentose phosphate pathway 3.20.20.70 214 9 61 3.01 4.91
3f4wA00 73.55 Pentose and glucuronate interconversionsMethane metabolismPutative hexulose 6 phosphate synthaseSalmonella enterica subsp. enterica serovar Typhimurium3-hexulose-6-phosphate synthase [EC:4.1.2.43] 3.20.20.70 211 10 63 2.98 4.71
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Displaying entries 1 to 13 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1f6kC00
MRDLKGIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV
GSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSMGIEQFGELYKNPKVLGVKFTAG
DFYLLERLKKAYPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVTNDLIEGILAN
GLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKFLS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1f6kC00
MRDLKGIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV
GSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPKV
LGVKFTAGDFYLLERLKKAYPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVTND
LIEGILANGLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKFLS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:55

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:55

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:20

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"