CATH Domain: 1f60A03 XML data for domain: 1f60A03

Molscript image for 1f60A03
1f60A03
PDB coordinates for domain 1f60A03

PDB 1f60, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.30 Elongation Factor Tu (Ef-tu); domain 3
2.40.30.10 Translation factors Gene3D
2.40.30.10.2
2.40.30.10.2.1
2.40.30.10.2.1.1
2.40.30.10.2.1.1.1
2.40.30.10.2.1.1.1.1

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Segment boundaries for domain 1f60A03

Chopping figure for domain 1f60A03
DomainStart PDB ResidueStop PDB Residue
1f60A01 2 236
1f60A02 239 327
1f60A03 333 440

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 2.40.30.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1r5bA03 88.46 Eukaryotic peptide chain release factor GTP-binding subunitProtein heterodimerization activityTranslation release factor activityPeptide chain release factor eRF subunit 2Schizosaccharomyces pombe 2.40.30.10 110 32 97 1.44 1.48
2c78A03 87.73 Thermus thermophilus HB8Elongation factor Tu-AElongation factor EF-Tu [EC:3.6.5.3] 2.40.30.10 94 24 82 1.27 1.54
1kjzA03 82.82 Pyrococcus abyssiTranslation initiation factor eIF-2 gamma subunitTranslation initiation factor 2 subunit gamma 2.40.30.10 92 17 72 1.97 2.73
2hmaA03 79.54 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [EC:2.1.1.61]TRNA-specific 2-thiouridylase mnmAStreptococcus pneumoniae 2.40.30.10 89 8 70 2.44 3.47
1aipE03 77.12 Elongation factor Tu-AElongation factor EF-Tu [EC:3.6.5.3]Thermus thermophilus 2.40.30.10 56 25 51 1.36 2.62
1pj5A05 76.69 N,N-dimethylglycine oxidaseArthrobacter globiformis 2.40.30.110 78 3 70 3.44 4.89
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1f60A03
KGCASFNATVIVLNHPGQISAGYSPVLDCHTAHIACRFDELLEKNDRRSGKKLEDHPKFLKSGDAALVKFVPSKPMCVEA
FSEYPPLGRFAVRDMRQTVAVGVIKSVD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1f60A03
KGCASFNATVIVLNHPGQISAGYSPVLDCHTAHIACRFDELLEKNDRRSGKKLEDHPKFLKSGDAALVKFVPSKPMCVEA
FSEYPPLGRFAVRDMRQTVAVGVIKSVD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:31

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"