CATH Domain: 1f2dA02 XML data for domain: 1f2dA02

Molscript image for 1f2dA02
1f2dA02
PDB coordinates for domain 1f2dA02

PDB 1f2d, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1100 Gene3D
3.40.50.1100.9
3.40.50.1100.9.1
3.40.50.1100.9.1.1
3.40.50.1100.9.1.1.1
3.40.50.1100.9.1.1.1.1

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Segment boundaries for domain 1f2dA02

Chopping figure for domain 1f2dA02
DomainStart PDB ResidueStop PDB Residue
1f2dA01 1 45
1f2dA01 168 341
1f2dA02 66 167

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.50.1100.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1j0aA02 87.21 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]Pyrococcus horikoshiiPropanoate metabolismPutative 1-aminocyclopropane-1-carboxylate deaminase 3.40.50.1100 104 24 84 1.90 2.25
1v7cA02 84.73 Threonine synthase [EC:4.2.3.1]Vitamin B6 metabolismGlycine, serine and threonine metabolismThreonine synthaseMetabolic pathways 3.40.50.1100 97 15 79 2.78 3.50
1p5jA02 84.15 Protein homodimerization activityL-serine ammonia-lyase activityGlycine, serine and threonine metabolismPyruvate biosynthetic processMetabolic pathways 3.40.50.1100 96 15 79 2.75 3.46
1m1nB03 78.48 Nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]Nitrogen metabolismAzotobacter vinelandiiNitrogenase molybdenum-iron protein beta chainMetabolic pathways 3.40.50.1980 106 7 69 3.07 4.40
1mioB04 77.38 Nitrogenase molybdenum-iron protein beta chainClostridium pasteurianum 3.40.50.1980 98 10 70 3.01 4.26
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1f2dA02
DYTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFA
NALQELEDAGHKPYPIPAGCSE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1f2dA02
DYTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFA
NALQELEDAGHKPYPIPAGCSE
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:30

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"