CATH Domain: 1f1sA03 XML data for domain: 1f1sA03

Molscript image for 1f1sA03
1f1sA03
PDB coordinates for domain 1f1sA03

PDB 1f1s, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.220 Chondroitinase Ac; Chain A, domain 3
2.60.220.10 Chondroitinase Ac; Chain A, domain 3 Gene3D
2.60.220.10.5
2.60.220.10.5.1
2.60.220.10.5.1.1
2.60.220.10.5.1.1.1
2.60.220.10.5.1.1.1.1

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Segment boundaries for domain 1f1sA03

Chopping figure for domain 1f1sA03
DomainStart PDB ResidueStop PDB Residue
1f1sA01 628 902
1f1sA02 249 622
1f1sA03 903 984

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 2.60.220.10.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1hn0A04 77.81 Chondroitin ABC endolyase 1Proteus vulgaris 2.60.220.10 122 10 59 2.81 4.76
1zjaA03 77.07 Pseudomonas mesoacidophilaSucrose isomerase 2.60.40.1180 78 1 62 2.57 4.13
1uokA03 76.77 Bacillus cereusOligo-1,6-glucosidase 2.60.40.1180 78 1 62 2.14 3.44
1lwjA03 76.29 4-alpha-glucanotransferase [EC:2.4.1.25]Thermotoga maritimaStarch and sucrose metabolism4-alpha-glucanotransferaseMetabolic pathways 2.60.40.1180 50 16 58 2.81 4.80
2qzuA02 73.19 Putative sulfatase yidJBacteroides fragilis 3.30.1120.10 84 4 57 2.78 4.87
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1f1sA03
SFDKLANSKEVELLENSSKQQVIYDKNSQTWAVIKHDNQESLINNQFKMNKAGLYLVQKVGNDYQNVYYQPQTMTKTDQL
AI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1f1sA03
SFDKLANSKEVELLENSSKQQVIYDKNSQTWAVIKHDNQESLINNQFKMNKAGLYLVQKVGNDYQNVYYQPQTMTKTDQL
AI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:47

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:47

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:30

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"