CATH Domain: 1f0yA01 XML data for domain: 1f0yA01

Molscript image for 1f0yA01
1f0yA01
PDB coordinates for domain 1f0yA01

PDB 1f0y, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.720 NAD(P)-binding Rossmann-like Domain Gene3D
3.40.50.720.20
3.40.50.720.20.1
3.40.50.720.20.1.1
3.40.50.720.20.1.1.1
3.40.50.720.20.1.1.1.1

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Segment boundaries for domain 1f0yA01

Chopping figure for domain 1f0yA01
DomainStart PDB ResidueStop PDB Residue
1f0yA01 12 207
1f0yA02 211 297

Structural Neighbourhood (27 entries)

There are 27 matching structural neighberhood comparisons for CATH ID 3.40.50.720.20.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 27 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3d1lB01 81.61 Bacteroides fragilis NCTC 9343Putative uncharacterized protein 3.40.50.720 151 11 73 2.71 3.66
1dljA01 81.57 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismPentose and glucuronate interconversionsAscorbate and aldarate metabolismMetabolic pathways 3.40.50.720 204 14 85 2.88 3.38
1jayA00 81.46 Archaeoglobus fulgidusPutative uncharacterized protein 3.40.50.720 212 11 76 2.58 3.36
1np3B01 81.17 Pantothenate and CoA biosynthesisMetabolic pathwaysValine, leucine and isoleucine biosynthesisKetol-acid reductoisomerasePseudomonas aeruginosa 3.40.50.720 182 12 79 2.75 3.48
1bg6A01 80.78 Arthrobacter sp. 1COpine dehydrogenase 3.40.50.720 192 9 86 3.40 3.92
2amfA01 80.66 Arginine and proline metabolismMetabolic pathwaysPutative pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2]Streptococcus pyogenes serotype M1 3.40.50.720 148 12 75 2.53 3.37
2pv7A01 80.46 T-proteinNovobiocin biosynthesisHaemophilus influenzaePhenylalanine, tyrosine and tryptophan biosynthesisPrephenate dehydrogenase [EC:1.3.1.12] 3.40.50.720 154 18 74 2.94 3.95
2o3jB01 80.23 Caenorhabditis elegansAmino sugar and nucleotide sugar metabolismIdentical protein bindingEmbryo development ending in birth or egg hatchingMetabolic pathways 3.40.50.720 205 11 86 3.42 3.96
3ckyA01 79.93 Eubacterium barkeri2-hydroxymethyl glutarate dehydrogenase 3.40.50.720 163 14 78 2.78 3.54
1ks9A01 79.90 Pantothenate and CoA biosynthesisMetabolic pathways2-dehydropantoate 2-reductase [EC:1.1.1.169]2-dehydropantoate 2-reductase activityPantothenate biosynthetic process from valine 3.40.50.720 167 8 80 3.18 3.94
2ew2B01 79.81 2-dehydropantoate 2-reductase [EC:1.1.1.169]Pantothenate and CoA biosynthesis2-dehydropantoate 2-reductaseMetabolic pathwaysEnterococcus faecalis 3.40.50.720 174 11 81 3.28 4.02
2cvzA01 79.43 Valine, leucine and isoleucine degradationMetabolic pathwaysThermus thermophilus HB83-hydroxyisobutyrate dehydrogenase3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] 3.40.50.720 153 14 75 2.67 3.56
2rcyA01 79.40 Arginine and proline metabolismMetabolic pathwaysPlasmodium falciparum 3D7Pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2] 3.40.50.720 148 12 72 2.68 3.70
1ur5C01 79.13 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismChloroflexus aurantiacus J-10-flMetabolic pathways 3.40.50.720 136 15 63 2.85 4.47
1i36A01 79.04 Methanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.50.720 159 12 76 2.72 3.55
3c24A01 78.64 Jannaschia sp. CCS1Putative uncharacterized protein 3.40.50.720 168 11 76 3.34 4.39
1txgA01 78.58 Archaeoglobus fulgidusGlycerophospholipid metabolismGlycerol-3-phosphate dehydrogenase [NAD(P)+]Glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] 3.40.50.720 180 8 82 3.78 4.60
2rafB01 78.23 [EC:1.-.-.-]OxidoreductaseLactobacillus plantarum 3.40.50.720 176 9 69 3.36 4.84
1vpdA01 78.00 Glyoxylate and dicarboxylate metabolismMetabolic pathwaysSalmonella enterica subsp. enterica serovar Typhimurium2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]Tartronate semialdehyde reductase (TSAR) 3.40.50.720 154 14 75 2.94 3.92
1hyeA01 77.90 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Methanocaldococcus jannaschiiPyruvate metabolismMetabolic pathways 3.40.50.720 147 15 63 2.68 4.24
2i76A01 77.78 Thermotoga maritimaPutative uncharacterized protein 3.40.50.720 142 5 69 3.08 4.44
2qytA01 77.75 Porphyromonas gingivalis2-dehydropantoate 2-reductase 3.40.50.720 179 10 81 3.68 4.51
1hyhA01 77.25 Weissella confusaL-2-hydroxyisocaproate dehydrogenase 3.40.50.720 141 12 63 3.12 4.93
1lssA00 76.83 Trk system potassium uptake protein TrkATrk system potassium uptake protein trkA homologMethanocaldococcus jannaschii 3.40.50.720 132 12 57 2.85 4.94
1o6zA02 76.73 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismHaloarcula marismortuiMetabolic pathways 3.40.50.720 142 16 61 2.65 4.33
2aefA01 75.07 Methanothermobacter thermautotrophicus str. Delta HCalcium-gated potassium channel mthK 3.40.50.720 115 11 54 2.43 4.49
3hhpA01 74.87 Citrate cycle (TCA cycle)Pyruvate metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysMalate dehydrogenase [EC:1.1.1.37] 3.40.50.720 138 14 59 2.77 4.64
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Displaying entries 1 to 27 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1f0yA01
KIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS
TDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEV
IKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1f0yA01
SSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEF
VEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFF
NPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:16

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:16

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:30

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"