CATH Domain: 1f0kA01 XML data for domain: 1f0kA01

Molscript image for 1f0kA01
1f0kA01
PDB coordinates for domain 1f0kA01

PDB 1f0k, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.2000 Glycogen Phosphorylase B; Gene3D
3.40.50.2000.12
3.40.50.2000.12.1
3.40.50.2000.12.1.1
3.40.50.2000.12.1.1.1
3.40.50.2000.12.1.1.1.1

[top]
Segment boundaries for domain 1f0kA01

Chopping figure for domain 1f0kA01
DomainStart PDB ResidueStop PDB Residue
1f0kA01 7 162
1f0kA01 339 357
1f0kA02 163 338

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 3.40.50.2000.12.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1dbwB00 76.65 Sinorhizobium melilotiTranscriptional regulatory protein fixJ 3.40.50.2300 125 9 64 2.99 4.63
1su8A02 76.03 Trinitrotoluene degradationCarboxydothermus hydrogenoformans Z-2901Carbon monoxide dehydrogenase 2Carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.99.2]Methane metabolism 3.40.50.2030 169 7 70 3.28 4.63
2qr3A00 75.94 Bacteroides fragilisTwo-component system response regulator 3.40.50.2300 119 13 64 3.01 4.70
2rjnA00 75.87 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomainNeptuniibacter caesariensis 3.40.50.2300 135 7 64 3.01 4.66
1w25B02 75.65 Two-component systemCell cycle - CaulobacterCaulobacter vibrioidesIdentical protein bindingTwo-component system, cell cycle response regulator 3.40.50.2300 143 9 64 3.19 4.98
1iirA02 74.69 Glycosyltransferase GtfBAmycolatopsis orientalis 3.40.50.2000 161 8 66 3.01 4.50
[1]
Displaying entries 1 to 6 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1f0kA01
KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWR
QARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGNPIPDA
TERVANEVSRVARAL
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1f0kA01
MMSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLR
IFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVG
NPIPDATERVANEVSRVARALEHHHHHH
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:22

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:22

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:30

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"