CATH Domain: 1f00I01 XML data for domain: 1f00I01

Molscript image for 1f00I01
1f00I01
PDB coordinates for domain 1f00I01

PDB 1f00, Chain I, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.920 Gene3D
2.60.40.920.1
2.60.40.920.1.1
2.60.40.920.1.1.1
2.60.40.920.1.1.1.1
2.60.40.920.1.1.1.1.1

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Segment boundaries for domain 1f00I01

Chopping figure for domain 1f00I01
DomainStart PDB ResidueStop PDB Residue
1f00I01 658 752
1f00I02 753 841
1f00I03 842 939

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 2.60.40.920.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cwvA02 89.62 InvasinYersinia pseudotuberculosis 2.60.40.920 97 28 94 1.76 1.86
1cwvA03 88.03 InvasinYersinia pseudotuberculosis 2.60.40.920 102 11 88 1.69 1.92
3cmgA04 82.66 Putative beta-galactosidaseBacteroides fragilis NCTC 9343 2.60.40.1560 87 12 85 3.17 3.72
1f00I02 78.89 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 2.60.40.1080 89 10 78 2.86 3.62
1ulvA03 78.04 GlucodextranaseArthrobacter globiformis 2.60.40.1560 86 8 82 3.63 4.42
1cwvA04 78.00 InvasinYersinia pseudotuberculosis 2.60.40.1080 91 7 78 3.74 4.74
1im3D00 71.06 Unique short US2 glycoproteinHuman herpesvirus 5 strain AD169 2.60.40.1200 95 7 90 4.40 4.86
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1f00I01
ASITEIKADKTTAVANGQDAITYTVKVMKGDKPVSNQEVTFTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVS
DVAVDVKAPEVEFFT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1f00I01
ASITEIKADKTTAVANGQDAITYTVKVMKGDKPVSNQEVTFTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVS
DVAVDVKAPEVEFFT
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:43

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:30

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"