CATH Domain: 1ezfA00 XML data for domain: 1ezfA00

Molscript image for 1ezfA00
1ezfA00
PDB coordinates for domain 1ezfA00

PDB 1ezf, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.600 Farnesyl Diphosphate Synthase
1.10.600.10 Farnesyl Diphosphate Synthase Gene3D
1.10.600.10.3
1.10.600.10.3.1
1.10.600.10.3.1.1
1.10.600.10.3.1.1.1
1.10.600.10.3.1.1.1.2

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Segment boundaries for domain 1ezfA00

Chopping figure for domain 1ezfA00
DomainStart PDB ResidueStop PDB Residue
1ezfA00 38 370

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1ezfA00
NSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEK
DRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLV
GEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYL
SRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIR
TQN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ezfA00
MDRNSLSNSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWR
FMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSAS
EFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHI
PDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIP
DSDPSSSKTRQIISTIRTQN
BLAST against CATH

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Domain History Events (5)

Classification merge by cuff on 26 Apr 2006 12:34

COMMENT: Lesley - Scores and superpositions are marginal. Functionally similar - terpenoid biosynthesis pathway. SCOP has these proteins assigned to same fold and superfamily so merge. SCOP uses the name: Fold: Terpenoid synthases FINAL: Lesley - Merge for the above stated reasons.

Flow stage update by cuff on 26 Apr 2006 12:34

COMMENT: Lesley - Scores and superpositions are marginal. Functionally similar - terpenoid biosynthesis pathway. SCOP has these proteins assigned to same fold and superfamily so merge. SCOP uses the name: Fold: Terpenoid synthases FINAL: Lesley - Merge for the above stated reasons.

Set cath from cathlist by auto on 05 Mar 2006 18:14

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:14

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:35

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"