CATH Domain: 1exrA02 XML data for domain: 1exrA02

Molscript image for 1exrA02
1exrA02
PDB coordinates for domain 1exrA02

PDB 1exr, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.238 Recoverin; domain 1
1.10.238.10 EF-hand Gene3D
1.10.238.10.13
1.10.238.10.13.1
1.10.238.10.13.1.1
1.10.238.10.13.1.1.1
1.10.238.10.13.1.1.1.1

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Segment boundaries for domain 1exrA02

Chopping figure for domain 1exrA02
DomainStart PDB ResidueStop PDB Residue
1exrA01 5 80
1exrA02 81 147

Structural Neighbourhood (32 entries)

There are 32 matching structural neighberhood comparisons for CATH ID 1.10.238.10.13.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 32 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2f3yA02 95.80 Phosphatidylinositol signaling systemCalcium signaling pathwayOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 68 83 97 0.66 0.68
1qtxA02 95.21 1.10.238.10 68 82 97 0.89 0.92
1ggzA01 93.57 Calcium ion bindingOlfactory transductionCalcium signaling pathwayPhosphatidylinositol signaling systemInsulin signaling pathway 1.10.238.10 76 41 88 0.85 0.96
1dtlA02 92.66 Cardiac muscle contractionCalcium signaling pathwayTroponin C, slow skeletal and cardiac musclesGallus gallusTroponin C, slow skeletal and cardiac muscles 1.10.238.10 63 36 94 1.80 1.91
1g4yR01 91.32 Calcium signaling pathwayPhosphatidylinositol signaling systemInsulin signaling pathwayOocyte meiosisGnRH signaling pathway 1.10.238.10 80 44 83 0.80 0.96
1g33A00 89.78 Rattus norvegicusParvalbumin alpha 1.10.238.10 73 28 91 1.95 2.12
1wdcB01 89.76 Myosin regulatory light chain, striated adductor muscleArgopecten irradians 1.10.238.10 70 23 90 1.53 1.70
1topA02 89.15 Gallus gallusTroponin C, skeletal muscle 1.10.238.10 87 34 77 1.24 1.61
1wrkA00 88.48 Cardiac muscle contractionCalcium signaling pathwayDilated cardiomyopathyHypertrophic cardiomyopathy (HCM)Calcium ion binding 1.10.238.10 82 41 81 1.58 1.93
1fi5A00 87.96 Cardiac muscle contractionCalcium signaling pathwayTroponin C, slow skeletal and cardiac musclesGallus gallusTroponin C, slow skeletal and cardiac muscles 1.10.238.10 81 35 82 1.75 2.12
1tizA00 87.19 Calcium-binding protein CMLArabidopsis thalianaPlant-pathogen interactionProbable calcium-binding protein CML34 1.10.238.10 66 25 97 2.65 2.73
1qx2A00 86.82 Protein S100-GBos taurus 1.10.238.10 75 43 89 3.84 4.30
1jfjA01 86.13 Entamoeba histolyticaCalcium-binding protein 1.10.238.10 63 22 94 2.61 2.78
1g8iB02 85.85 Calcium ion bindingNeuronal calcium sensor 1Homo sapiensProtein binding 1.10.238.10 91 25 73 2.11 2.87
2os8B01 85.16 Myosin regulatory light chainPlacopecten magellanicus 1.10.238.10 65 27 92 1.97 2.13
2bl0B01 84.35 Physarum polycephalumMyosin regulatory light chain 1.10.238.10 68 16 94 4.67 4.96
1qasA01 84.23 Calcium ion bindingPhosphatidylinositol signaling systemCalcium signaling pathwayRattus norvegicusElevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger 1.10.238.10 88 13 75 2.15 2.87
1xk4E00 82.68 Protein S100-A8Calcium ion bindingHomo sapiensInflammatory responseProtein binding 1.10.238.10 89 16 75 3.52 4.68
1jfjA02 81.86 Entamoeba histolyticaCalcium-binding protein 1.10.238.10 71 22 87 3.41 3.91
1a4pA00 81.80 Protein S100-A10Homo sapiens 1.10.238.10 92 20 71 3.11 4.34
1djxB01 81.69 Calcium ion bindingCalcium signaling pathwayPhosphatidylinositol signaling systemRattus norvegicusElevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger 1.10.238.10 52 17 74 2.65 3.55
1k90E01 81.12 Phosphatidylinositol signaling systemCalcium signaling pathwayOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 74 44 90 3.49 3.85
1yr5A00 80.41 Calcium signaling pathwayPhosphatidylinositol signaling systemOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 146 83 45 0.92 2.00
1eg3A04 80.38 Cell surfaceCostamereCytoskeletonDystrophin-associated glycoprotein complexActin binding 1.10.238.10 82 14 78 3.46 4.43
1c07A00 79.68 Plasma membraneClathrin coat assemblyEpidermal growth factor receptor substrate 15Homo sapiensEpidermal growth factor receptor signaling pathway 1.10.238.10 95 17 68 3.20 4.68
1jbaA01 79.59 Olfactory transductionBos taurusGuanylate cyclase activator 1Guanylyl cyclase-activating protein 2 1.10.238.10 83 22 80 3.76 4.66
1wdcB02 78.67 Myosin regulatory light chain, striated adductor muscleArgopecten irradians 1.10.238.10 68 25 95 3.76 3.93
1m45A02 78.34 Vesicle targetingIdentical protein bindingMyosin II heavy chain bindingProtein localizationVesicle 1.10.238.10 75 32 86 3.49 4.03
1s26D01 77.88 Calcium signaling pathwayPhosphatidylinositol signaling systemOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 59 33 80 3.54 4.39
1s6iA02 77.26 Calcium-dependent protein kinase SK5Glycine max 1.10.238.10 106 41 61 2.45 4.00
1auiB00 76.41 Calcium signaling pathwayOocyte meiosisApoptosisMAPK signaling pathwayNatural killer cell mediated cytotoxicity 1.10.238.10 165 37 40 1.52 3.74
2scpA00 73.16 Hediste diversicolorSarcoplasmic calcium-binding protein 1.10.238.10 174 25 37 1.56 4.18
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Displaying entries 1 to 32 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1exrA02
SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1exrA02
SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:06

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:06

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:29

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"