CATH Domain: 1exrA01 XML data for domain: 1exrA01

Molscript image for 1exrA01
1exrA01
PDB coordinates for domain 1exrA01

PDB 1exr, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.238 Recoverin; domain 1
1.10.238.10 EF-hand Gene3D
1.10.238.10.8
1.10.238.10.8.1
1.10.238.10.8.1.1
1.10.238.10.8.1.1.1
1.10.238.10.8.1.1.1.1

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Segment boundaries for domain 1exrA01

Chopping figure for domain 1exrA01
DomainStart PDB ResidueStop PDB Residue
1exrA01 5 80
1exrA02 81 147

Structural Neighbourhood (23 entries)

There are 23 matching structural neighberhood comparisons for CATH ID 1.10.238.10.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 23 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ggzA01 96.09 Calcium ion bindingOlfactory transductionCalcium signaling pathwayPhosphatidylinositol signaling systemInsulin signaling pathway 1.10.238.10 76 80 100 1.01 1.01
1exrA02 93.49 Phosphatidylinositol signaling systemCalmodulinParamecium tetraureliaCalmodulin 1.10.238.10 67 43 88 0.96 1.09
2f3yA02 92.88 Phosphatidylinositol signaling systemCalcium signaling pathwayOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 68 42 89 1.88 2.10
1qtxA02 92.61 1.10.238.10 68 44 89 1.46 1.63
1g4yR01 92.36 Calcium signaling pathwayPhosphatidylinositol signaling systemInsulin signaling pathwayOocyte meiosisGnRH signaling pathway 1.10.238.10 80 93 95 1.53 1.61
1dtlA02 89.88 Cardiac muscle contractionCalcium signaling pathwayTroponin C, slow skeletal and cardiac musclesGallus gallusTroponin C, slow skeletal and cardiac muscles 1.10.238.10 63 31 82 1.97 2.38
1fi5A00 89.04 Cardiac muscle contractionCalcium signaling pathwayTroponin C, slow skeletal and cardiac musclesGallus gallusTroponin C, slow skeletal and cardiac muscles 1.10.238.10 81 27 88 2.23 2.51
1wrkA00 88.91 Cardiac muscle contractionCalcium signaling pathwayDilated cardiomyopathyHypertrophic cardiomyopathy (HCM)Calcium ion binding 1.10.238.10 82 61 87 2.26 2.57
1g33A00 88.89 Rattus norvegicusParvalbumin alpha 1.10.238.10 73 27 90 2.96 3.26
1wdcB01 88.85 Myosin regulatory light chain, striated adductor muscleArgopecten irradians 1.10.238.10 70 32 90 2.04 2.25
1topA02 88.29 Gallus gallusTroponin C, skeletal muscle 1.10.238.10 87 32 82 2.32 2.80
1qx2A00 86.80 Protein S100-GBos taurus 1.10.238.10 75 33 93 4.58 4.90
1g8iB02 85.65 Calcium ion bindingNeuronal calcium sensor 1Homo sapiensProtein binding 1.10.238.10 91 21 80 2.88 3.59
1tizA00 84.04 Calcium-binding protein CMLArabidopsis thalianaPlant-pathogen interactionProbable calcium-binding protein CML34 1.10.238.10 66 28 86 3.25 3.74
1qasA01 83.07 Calcium ion bindingPhosphatidylinositol signaling systemCalcium signaling pathwayRattus norvegicusElevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger 1.10.238.10 88 15 85 3.57 4.19
1jfjA01 83.06 Entamoeba histolyticaCalcium-binding protein 1.10.238.10 63 30 82 3.00 3.62
1omrA02 82.76 Bos taurusRecoverinRecoverin 1.10.238.10 88 15 76 3.62 4.75
2os8B01 82.25 Myosin regulatory light chainPlacopecten magellanicus 1.10.238.10 65 36 85 2.19 2.56
1eg3A04 81.76 Cell surfaceCostamereCytoskeletonDystrophin-associated glycoprotein complexActin binding 1.10.238.10 82 10 81 4.04 4.94
1k90E01 81.15 Phosphatidylinositol signaling systemCalcium signaling pathwayOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 74 93 97 4.38 4.50
1jfjA02 80.28 Entamoeba histolyticaCalcium-binding protein 1.10.238.10 71 22 85 4.00 4.68
1omrA01 79.57 Bos taurusRecoverinRecoverin 1.10.238.10 86 23 84 4.12 4.85
1jbaA01 79.42 Olfactory transductionBos taurusGuanylate cyclase activator 1Guanylyl cyclase-activating protein 2 1.10.238.10 83 18 89 3.62 4.06
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Displaying entries 1 to 23 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1exrA01
TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1exrA01
TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:05

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:05

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:29

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"