CATH Domain: 1esjA00 XML data for domain: 1esjA00

Molscript image for 1esjA00
1esjA00
PDB coordinates for domain 1esjA00

PDB 1esj, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.1190 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase
3.40.1190.20 Gene3D
3.40.1190.20.3
3.40.1190.20.3.1
3.40.1190.20.3.1.1
3.40.1190.20.3.1.1.1
3.40.1190.20.3.1.1.1.1

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Segment boundaries for domain 1esjA00

Chopping figure for domain 1esjA00
DomainStart PDB ResidueStop PDB Residue
1esjA00 -11 272

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.1190.20.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2r3bA01 78.94 YjeF-related proteinEnterococcus faecalis 3.40.1190.20 266 9 80 3.52 4.38
1vi9A00 78.85 Vitamin B6 metabolismMetabolic pathwaysPyridoxine kinase [EC:2.7.1.35]CytoplasmPyridoxal 5'-phosphate salvage 3.40.1190.20 279 9 81 3.47 4.25
2i5bA00 78.01 Thiamine metabolismBacillus subtilisPyridoxine kinasePhosphomethylpyrimidine kinase [EC:2.7.4.7]Metabolic pathways 3.40.1190.20 269 14 78 3.36 4.26
1ub0A00 77.75 TransferaseThiamine metabolismHydroxymethylpyrimidine kinase [EC:2.7.1.49]Phosphomethylpyrimidine kinase [EC:2.7.4.7]Metabolic pathways 3.40.1190.20 246 12 75 3.21 4.28
2yxtA00 77.34 Zinc ion bindingPyridoxal kinase activityPotassium ion bindingMetabolic pathwaysCell proliferation 3.40.1190.20 304 9 76 3.41 4.45
1tyyB00 75.97 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismFructose and mannose metabolismMetabolic pathwaysFructokinase [EC:2.7.1.4] 3.40.1190.20 292 8 73 3.58 4.84
2qhpA00 75.86 Fructokinase [EC:2.7.1.4]Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismBacteroides thetaiotaomicronFructokinase 3.40.1190.20 275 8 73 3.67 4.96
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1esjA00
MRGSHHHHHHGSMDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGT
LSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGG
DIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGSLLTSVVGAFCAVEENPLFAAIAAISSYGVA
AQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEWATIERVTVS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1esjA00
MRGSHHHHHHGSMDAQSAAKCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGT
LSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGG
DIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGSLLTSVVGAFCAVEENPLFAAIAAISSYGVA
AQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEWATIERVTVS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:52

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"