CATH Domain: 1eokA00 XML data for domain: 1eokA00

Molscript image for 1eokA00
1eokA00
PDB coordinates for domain 1eokA00

PDB 1eok, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.80 Glycosidases Gene3D
3.20.20.80.68
3.20.20.80.68.1
3.20.20.80.68.1.1
3.20.20.80.68.1.1.1
3.20.20.80.68.1.1.1.1

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Segment boundaries for domain 1eokA00

Chopping figure for domain 1eokA00
DomainStart PDB ResidueStop PDB Residue
1eokA00 8 289

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.20.20.80.68.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3fndA01 79.88 ChitinaseBacteroides thetaiotaomicron 3.20.20.80 261 14 78 2.75 3.49
1edtA00 79.15 Endo-beta-N-acetylglucosaminidase HStreptomyces plicatus 3.20.20.80 265 15 79 3.88 4.86
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1eokA00
NGVCIAYYITDGRNPTFKLKDIPDKVDMVILFGLKYWSLQDTTKLPGGTGMMGSFKSYKDLDTQIRSLQSRGIKVLQNID
DDVSWQSSKPGGFASAAAYGDAIKSIVIDKWKLDGISLDIEHSGAKPNPIPTFPGYAATGYNGWYSGSMAATPAFLNVIS
ELTKYFGTTAPNNKQLQIASGIDVYAWNKIMENFRNNFNYIQLQSYGANVSRTQLMMNYATGTNKIPASKMVFGAYAEGG
TNQANDVEVAKWTPTQGAKGGMMIYTYNSNVSYANAVRDAVK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1eokA00
ATALAGSNGVCIAYYITDGRNPTFKLKDIPDKVDMVILFGLKYWSLQDTTKLPGGTGMMGSFKSYKDLDTQIRSLQSRGI
KVLQNIDDDVSWQSSKPGGFASAAAYGDAIKSIVIDKWKLDGISLDIEHSGAKPNPIPTFPGYAATGYNGWYSGSMAATP
AFLNVISELTKYFGTTAPNNKQLQIASGIDVYAWNKIMENFRNNFNYIQLQSYGANVSRTQLMMNYATGTNKIPASKMVF
GAYAEGGTNQANDVEVAKWTPTQGAKGGMMIYTYNSNVSYANAVRDAVKN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:23

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"