CATH Domain: 1elvA02 XML data for domain: 1elvA02

Molscript image for 1elvA02
1elvA02
PDB coordinates for domain 1elvA02

PDB 1elv, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.10 Thrombin, subunit H
2.40.10.10 Trypsin-like serine proteases Gene3D
2.40.10.10.56
2.40.10.10.56.1
2.40.10.10.56.1.1
2.40.10.10.56.1.1.1
2.40.10.10.56.1.1.1.1

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Segment boundaries for domain 1elvA02

Chopping figure for domain 1elvA02
DomainStart PDB ResidueStop PDB Residue
1elvA01 437 532
1elvA01 656 664
1elvA02 423 436
1elvA02 534 655
1elvA03 342 409

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 2.40.10.10.56.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1q3xA02 90.10 Serine-type endopeptidase activityHomo sapiensMannan-binding lectin serine protease 2Calcium-dependent protein bindingComplement activation, lectin pathway 2.40.10.10 137 42 91 1.93 2.12
2hlcA02 88.65 CollagenaseHypoderma lineatum 2.40.10.10 126 27 94 2.16 2.29
1si5H01 88.40 Pathways in cancerHepatocyte growth factorEpithelial to mesenchymal transitionRenal cell carcinomaCytokine-cytokine receptor interaction 2.40.10.10 119 24 91 2.26 2.48
2asuB01 88.19 Hepatocyte growth factor-like proteinHomo sapiens 2.40.10.10 122 24 92 2.77 2.98
1dleB02 80.34 Complement factor BComplement bindingHomo sapiensComponent factor B [EC:3.4.21.47]Complement and coagulation cascades 2.40.10.10 142 19 69 2.38 3.41
2qf3B02 80.16 Protease degSProtein bindingSerine protease DegS [EC:3.4.21.-]Escherichia coli K-12 2.40.10.10 103 11 71 3.06 4.28
1svpA02 73.09 Sindbis virusStructural polyprotein 2.40.10.10 86 6 54 2.54 4.64
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1elvA02
IIGGSDADIKNFPWCLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVAYVFTPNMICAGGEKG
MDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGTYGLYTRVKN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1elvA02
IIGGSDADIKNFPWCLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTP
NMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGTYGLYTRVKN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:28

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:28

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:28

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"