CATH Domain: 1egaA02 XML data for domain: 1egaA02

Molscript image for 1egaA02
1egaA02
PDB coordinates for domain 1egaA02

PDB 1ega, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.300 GMP Synthetase; Chain A, domain 3
3.30.300.20 Gene3D
3.30.300.20.7
3.30.300.20.7.1
3.30.300.20.7.1.1
3.30.300.20.7.1.1.1
3.30.300.20.7.1.1.1.1

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Segment boundaries for domain 1egaA02

Chopping figure for domain 1egaA02
DomainStart PDB ResidueStop PDB Residue
1egaA01 4 184
1egaA02 189 294

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.30.300.20.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lqlA02 79.79 Mycoplasma pneumoniaeUncharacterized protein MG427 homolog 3.30.300.20 103 5 84 3.83 4.51
3h90A02 78.52 Ferrous-iron efflux pump FieFCellular cadmium ion homeostasisCellular zinc ion homeostasisCadmium ion transportEscherichia coli K-12 3.30.70.1350 84 7 71 3.04 4.24
2vqeC01 77.28 RibosomeThermus thermophilus HB8Small subunit ribosomal protein S330S ribosomal protein S3 3.30.300.20 91 7 69 3.29 4.71
1ib8A01 76.75 Hypothetical proteinRibosome maturation factor rimPStreptococcus pneumoniae 3.30.300.70 83 14 73 3.67 4.99
3gkuA02 76.53 Clostridium symbiosum ATCC 14940Probable RNA-binding protein 3.30.300.120 77 11 62 2.69 4.32
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1egaA02
SQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEM
FEAPVHLELWVKVKSGWADDERALRS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1egaA02
SQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEM
FEAPVHLELWVKVKSGWADDERALRS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:27

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"