CATH Domain: 1edzA02 XML data for domain: 1edzA02

Molscript image for 1edzA02
1edzA02
PDB coordinates for domain 1edzA02

PDB 1edz, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.192 Leucine Dehydrogenase; Chain A, domain 1
3.40.192.10 Leucine Dehydrogenase, chain A, domain 1 Gene3D
3.40.192.10.12
3.40.192.10.12.1
3.40.192.10.12.1.1
3.40.192.10.12.1.1.1
3.40.192.10.12.1.1.1.1

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Segment boundaries for domain 1edzA02

Chopping figure for domain 1edzA02
DomainStart PDB ResidueStop PDB Residue
1edzA01 3 10
1edzA01 149 296
1edzA02 13 120
1edzA02 297 319

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.192.10.12.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2rgyA01 77.91 LacI family transcriptional regulatorBurkholderia phymatum STM815Transcriptional regulator, LacI family 3.40.50.2300 122 8 71 2.84 3.96
2obxA00 77.87 Riboflavin metabolismRiboflavin synthase beta chain [EC:2.5.1.-]6,7-dimethyl-8-ribityllumazine synthase 1Mesorhizobium lotiMetabolic pathways 3.40.50.960 150 4 71 2.71 3.80
2q5cA01 77.58 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.2300 97 7 70 2.70 3.84
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1edzA02
VAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDLRVIEDKDFLEEAIIQANGDDSV
NGIMVYFPVFGNAQDQYLQQVVCKEKDVKVTIAMLLRNMLRLVRNVELSKE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1edzA02
VAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDLRVIEDKDFLEEAIIQANGDDSV
NGIMVYFPVFGNAQDQYLQQVVCKEKDVKVTIAMLLRNMLRLVRNVELSKEK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:26

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"