CATH Domain: 1edhA02 XML data for domain: 1edhA02

Molscript image for 1edhA02
1edhA02
PDB coordinates for domain 1edhA02

PDB 1edh, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.60 Cadherins Gene3D
2.60.40.60.3
2.60.40.60.3.1
2.60.40.60.3.1.1
2.60.40.60.3.1.1.1
2.60.40.60.3.1.1.1.1

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Segment boundaries for domain 1edhA02

Chopping figure for domain 1edhA02
DomainStart PDB ResidueStop PDB Residue
1edhA01 3 101
1edhA02 102 213

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 2.60.40.60.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1l3wA03 85.33 EP-cadherinXenopus laevis 2.60.40.60 114 25 91 2.50 2.74
1l3wA04 84.64 EP-cadherinXenopus laevis 2.60.40.60 106 27 89 2.26 2.53
1ze3C01 78.97 Fimbrial chaperone proteinChaperone protein fimCEscherichia coli K-12 2.60.40.360 117 9 80 3.87 4.82
2xg5A01 78.95 Chaperone protein PapDChaperone protein papDEscherichia coli 2.60.40.360 121 8 82 4.09 4.95
1f00I02 77.74 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 2.60.40.1080 89 5 71 3.41 4.77
1l3wA05 77.03 EP-cadherinXenopus laevis 2.60.40.60 107 14 83 3.25 3.91
1ix2A00 75.32 Escherichia coliCopper resistance protein C 2.60.40.1220 97 16 71 3.56 4.98
3cmgA02 75.12 Putative beta-galactosidaseBacteroides fragilis NCTC 9343 2.60.40.320 118 4 79 3.94 4.95
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1edhA02
NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDR
ESYPTYTLVVQAADLQGEGLSTTAKAVITVKD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1edhA02
NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDR
ESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:41

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:41

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:26

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"