CATH Domain: 1ed1A00 XML data for domain: 1ed1A00

Molscript image for 1ed1A00
1ed1A00
PDB coordinates for domain 1ed1A00

PDB 1ed1, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.150 DNA polymerase; domain 1
1.10.150.90 Gene3D
1.10.150.90.1
1.10.150.90.1.1
1.10.150.90.1.1.1
1.10.150.90.1.1.1.1
1.10.150.90.1.1.1.1.1

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Segment boundaries for domain 1ed1A00

Chopping figure for domain 1ed1A00
DomainStart PDB ResidueStop PDB Residue
1ed1A00 6 119

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.10.150.90.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1hekA00 81.44 Gag polyproteinEquine infectious anemia virus (ISOLATE WYOMING) 1.10.150.90 113 12 89 4.23 4.73
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ed1A00
SVLSGKKADELEKIRLRPGGKKKYMLKHVVWAANELDRFGLAESLLENKEGCQKILSVLAPLVPTGSENLKSLYNTVCVI
WCIHAEEKVKHTEEAKQIVQRHLVVETGTAETMP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ed1A00
MGARNSVLSGKKADELEKIRLRPGGKKKYMLKHVVWAANELDRFGLAESLLENKEGCQKILSVLAPLVPTGSENLKSLYN
TVCVIWCIHAEEKVKHTEEAKQIVQRHLVVETGTAETMP
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:04

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:25

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"