Set cath from cathlist by auto on 05 Mar 2006 19:22
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
CATH Domain: 1ecfA02
1ecfA02
PDB 1ecf, Chain A, Domain 2
| CATH Code | Level Description | Links |
|---|---|---|
 3
| Alpha Beta | |
 3.40
| 3-Layer(aba) Sandwich | |
 3.40.50
| Rossmann fold | |
 3.40.50.2020
| Gene3D | |
 3.40.50.2020.20
| ||
 3.40.50.2020.20.1
| ||
 3.40.50.2020.20.1.1
| ||
 3.40.50.2020.20.1.1.1
| ||
 3.40.50.2020.20.1.1.1.1
|
Segment boundaries for domain 1ecfA02
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1ecfA01 | 1 | 275 |
| 1ecfA01 | 401 | 411 |
| 1ecfA01 | 446 | 480 |
| 1ecfA02 | 276 | 326 |
| 1ecfA02 | 349 | 400 |
| 1ecfA02 | 412 | 445 |
Structural Neighbourhood (1 entries)
There are 1 matching structural neighberhood comparisons for CATH ID 3.40.50.2020.20.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 1 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
|
1u9yA02 | 84.16 | 3.40.50.2020 | 124 | 21 | 88 | 3.95 | 4.47 |
[1]
Displaying entries 1 to 1 (page 1 of 1)
Domain ATOM Sequence
>pdb|1ecfA02 VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKKLNANRAEFRDKNVLLVDDSIVRGTTSEQ IIEMAREAGAKKVYLASAAPEIRATELIAHGREVDEIRQIIGADGLIFQDLNDLIDA
Domain History Events (3)
Flow stage update by auto on 05 Mar 2006 19:22
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
Insertion by auto on 05 Mar 2006 16:26
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"
