CATH Domain: 1e87A00 XML data for domain: 1e87A00

Molscript image for 1e87A00
1e87A00
PDB coordinates for domain 1e87A00

PDB 1e87, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.8
3.10.100.10.8.1
3.10.100.10.8.1.1
3.10.100.10.8.1.1.1
3.10.100.10.8.1.1.1.3

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Segment boundaries for domain 1e87A00

Chopping figure for domain 1e87A00
DomainStart PDB ResidueStop PDB Residue
1e87A00 83 199

Structural Neighbourhood (16 entries)

There are 16 matching structural neighberhood comparisons for CATH ID 3.10.100.10.8.1.1.1.3 (SIMAX score < 5)

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Displaying entries 1 to 16 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2h2tB01 89.63 Positive regulation of nitric-oxide synthase 2 biosynthetic processIntegral to plasma membraneHematopoietic cell lineagePositive regulation of nitric-oxide synthase activityPositive regulation of killing of cells of another organism 3.10.100.10 116 25 91 1.69 1.85
1kza100 87.80 Rattus norvegicusMannose bindingProtein self-associationMannose-binding lectinMannose-binding protein C 3.10.100.10 115 14 88 2.01 2.27
1hq8A00 87.22 Positive regulation of interferon-gamma productionPositive regulation of natural killer cell mediated cytotoxicityPositive regulation of nitric oxide biosynthetic processMHC class I protein bindingNatural killer cell activation 3.10.100.10 123 22 91 2.39 2.62
3bdwA00 87.17 Killer cell lectin-like receptor subfamily D, member 1Natural killer cell mediated cytotoxicityNatural killer cells antigen CD94Antigen processing and presentationGraft-versus-host disease 3.10.100.10 123 25 90 2.40 2.66
1h8uB00 86.74 Bone marrow proteoglycanHomo sapiensBone marrow proteoglycanExtracellular regionSugar binding 3.10.100.10 116 15 83 2.03 2.43
1byfA00 85.70 LectinPolyandrocarpa misakiensis 3.10.100.10 123 14 81 2.27 2.79
1g1tA01 85.69 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 119 17 80 2.27 2.81
1jznA00 85.43 Galactose-specific lectinCrotalus atrox 3.10.100.10 135 20 82 2.29 2.79
1wmzA00 85.25 Cucumaria echinataLectin CEL-I, N-acetyl-D-galactosamine-specific C-type 3.10.100.10 140 16 79 2.21 2.79
1tn3A00 85.04 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 135 19 80 2.65 3.31
1sl6A00 83.46 Integral to plasma membraneCell-cell recognitionVirion attachment to host cell surface receptorVirion bindingHomo sapiens 3.10.100.10 168 30 67 2.66 3.92
1rjhA00 82.80 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 118 16 80 2.63 3.27
1rtm100 82.29 Calcium ion bindingMannose bindingRattus norvegicusProtein homodimerization activityExtracellular space 3.10.100.10 149 14 76 3.08 4.03
3fd4A00 80.54 Glycoprotein 42Human herpesvirus 4 (strain B95-8) 3.10.100.10 140 17 78 3.81 4.85
1eslA00 79.39 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 157 15 63 2.66 4.22
1cwvA05 76.56 InvasinYersinia pseudotuberculosis 3.10.100.10 100 8 67 3.18 4.71
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Displaying entries 1 to 16 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1e87A00
SSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHWVGLKKEPGHPWKWSNGKEFN
NWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNKPYK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1e87A00
VSSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHWVGLKKEPGHPWKWSNGKEF
NNWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNKPYK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:13

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"