CATH Domain: 1dynA00 XML data for domain: 1dynA00

Molscript image for 1dynA00
1dynA00
PDB coordinates for domain 1dynA00

PDB 1dyn, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.29 PH-domain like
2.30.29.30 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) Gene3D
2.30.29.30.19
2.30.29.30.19.1
2.30.29.30.19.1.1
2.30.29.30.19.1.1.1
2.30.29.30.19.1.1.1.1

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Segment boundaries for domain 1dynA00

Chopping figure for domain 1dynA00
DomainStart PDB ResidueStop PDB Residue
1dynA00 10 122

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 2.30.29.30.19.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2dn6A00 85.69 CytoplasmPlasma membraneSwitch-associated protein 70Homo sapiens 2.30.29.30 115 15 88 4.08 4.60
3cxbB00 84.90 Kinesin bindingPleckstrin homology domain-containing family M member 2Golgi organizationHomo sapiens 2.30.29.30 102 17 86 3.06 3.53
1qqgA01 84.62 Phosphoinositide 3-kinase bindingAldosterone-regulated sodium reabsorptionNeurotrophin signaling pathwayNegative regulation of insulin secretionInsulin-like growth factor receptor signaling pathway 2.30.29.30 103 19 79 1.80 2.26
1qqgA02 82.57 Phosphoinositide 3-kinase bindingAldosterone-regulated sodium reabsorptionNeurotrophin signaling pathwayNegative regulation of insulin secretionInsulin-like growth factor receptor signaling pathway 2.30.29.30 104 11 89 4.23 4.73
1t77A01 82.14 Lipopolysaccharide-responsive and beige-like anchor proteinHomo sapiensProtein binding 2.30.29.40 105 7 79 3.75 4.71
2coaA01 81.06 Homo sapiensSerine/threonine-protein kinase D2 2.30.29.30 118 8 85 3.83 4.47
1plsA00 81.01 Soluble fractionInhibition of phospholipase C activity involved in G-protein coupled receptor signaling pathwayHemopoietic progenitor cell differentiationActin cytoskeleton reorganizationRegulation of cell diameter 2.30.29.30 113 20 92 4.51 4.90
1mixA02 80.38 Talin-1Focal adhesionFocal adhesionGallus gallusTalin 2.30.29.30 93 10 81 3.28 4.03
1btkA00 79.95 Induction of apoptosis by extracellular signalsPhosphatidylinositol-3,4,5-trisphosphate bindingIdentical protein bindingPlasma membraneB cell receptor signaling pathway 2.30.29.30 160 16 65 2.94 4.48
1pfjA00 79.14 Positive regulation of transcription from RNA polymerase II promoterGeneral RNA polymerase II transcription factor activityGeneral transcription factor IIH subunit 1Nucleotide excision repairRegulation of cyclin-dependent protein kinase activity 2.30.29.30 108 12 82 4.05 4.92
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1dynA00
ILVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVY
KDYRQLELACETQEEVDSWKASFLRAGVYPERV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1dynA00
MKTSGNQDEILVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFAL
FNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAGVYPERVGDK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:47

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"