CATH Domain: 1dy5A00 XML data for domain: 1dy5A00

Molscript image for 1dy5A00
1dy5A00
PDB coordinates for domain 1dy5A00

PDB 1dy5, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.130 P-30 Protein
3.10.130.10 P-30 Protein Gene3D
3.10.130.10.1
3.10.130.10.1.1
3.10.130.10.1.1.1
3.10.130.10.1.1.1.1
3.10.130.10.1.1.1.1.1

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Segment boundaries for domain 1dy5A00

Chopping figure for domain 1dy5A00
DomainStart PDB ResidueStop PDB Residue
1dy5A00 1 124

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.10.130.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2op2A00 96.19 Bos taurusPancreatic ribonuclease [EC:3.1.27.5]Ribonuclease pancreaticProtein binding 3.10.130.10 124 97 100 0.95 0.95
1eicA00 95.79 Bos taurusPancreatic ribonuclease [EC:3.1.27.5]Ribonuclease pancreaticProtein binding 3.10.130.10 124 98 100 1.00 1.00
1agiA00 89.91 Receptor bindingPositive regulation of protein secretionActin bindingExtracellular spaceAngiogenin-1 3.10.130.10 125 33 92 1.94 2.11
1gqvA00 87.88 RNA catabolic processPancreatic ribonuclease [EC:3.1.27.5]Homo sapiensExtracellular regionNon-secretory ribonuclease 3.10.130.10 135 34 85 2.20 2.58
2vq8A00 87.42 3.10.130.10 128 24 87 2.62 2.99
1yv4A00 86.32 Rana pipiensProtein P-30 3.10.130.10 103 24 81 2.88 3.54
2p7sA00 86.30 Rana pipiensAmphinase-2 3.10.130.10 107 26 83 2.86 3.41
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1dy5A00
KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKDGQTNCYQSYSTMS
ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1dy5A00
KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKDGQTNCYQSYSTMS
ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:14

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"