CATH Domain: 1dvkA00 XML data for domain: 1dvkA00

Molscript image for 1dvkA00
1dvkA00
PDB coordinates for domain 1dvkA00

PDB 1dvk, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.940 RNA Binding Protein, Prp18; Chain A
1.20.940.10 RNA Binding Protein, Prp18; Chain A Gene3D
1.20.940.10.1
1.20.940.10.1.1
1.20.940.10.1.1.1
1.20.940.10.1.1.1.1
1.20.940.10.1.1.1.1.1

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Segment boundaries for domain 1dvkA00

Chopping figure for domain 1dvkA00
DomainStart PDB ResidueStop PDB Residue
1dvkA00 79 247

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1dvkA00
MRIQEAIAQDKTISVIIDPSQIGSTEGKPLLSMKCNLYIHEILSRWKASLEAYHPELFLDTKKALFPLLLQLRRNQLAPD
LLISLATVLYHLQQPKEINLAVQSYMKLSIGNVAWPIGVANIMIDERTRLWITSIKRLITFEEWYTSNH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1dvkA00
MRIQEAIAQDKTISVIIDPSQIGSTEGKPLLSMKCNLYIHEILSRWKASLEAYHPELFLDTKKALFPLLLQLRRNQLAPD
LLISLATVLYHLQQPKEINLAVQSYMKLSIGNVAWPIGVTSVGIHARSAHSKIQGGRNAANIMIDERTRLWITSIKRLIT
FEEWYTSNHDSLA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:42

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"