CATH Domain: 1duvG01 XML data for domain: 1duvG01

Molscript image for 1duvG01
1duvG01
PDB coordinates for domain 1duvG01

PDB 1duv, Chain G, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1370 Gene3D
3.40.50.1370.2
3.40.50.1370.2.1
3.40.50.1370.2.1.1
3.40.50.1370.2.1.1.1
3.40.50.1370.2.1.1.1.1

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Segment boundaries for domain 1duvG01

Chopping figure for domain 1duvG01
DomainStart PDB ResidueStop PDB Residue
1duvG01 1 135
1duvG01 319 333
1duvG02 136 318

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.40.50.1370.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ef0A01 92.07 Thermus thermophilus HB8Arginine and proline metabolismOrnithine carbamoyltransferaseOrnithine carbamoyltransferase [EC:2.1.3.3]Metabolic pathways 3.40.50.1370 144 40 96 1.94 2.02
1ml4A01 91.01 Pyrimidine metabolismAspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]Pyrococcus abyssiAspartate carbamoyltransferaseAlanine, aspartate and glutamate metabolism 3.40.50.1370 149 26 97 1.62 1.66
3kznA01 90.34 N-acetylornithine carbamoyltransferaseXanthomonas campestris pv. campestrisN-acetylornithine carbamoyltransferase [EC:2.1.3.9] 3.40.50.1370 161 38 86 1.43 1.66
3d6nB01 86.35 Pyrimidine metabolismAspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]Aspartate carbamoyltransferaseAlanine, aspartate and glutamate metabolismMetabolic pathways 3.40.50.1370 147 21 92 3.09 3.33
1js1Y01 85.71 N-acetylornithine carbamoyltransferaseBacteroides thetaiotaomicronN-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11] 3.40.50.1370 164 23 85 2.51 2.94
2fepA01 79.43 Bacillus subtilisCatabolite control protein ALacI family transcriptional regulator 3.40.50.2300 133 8 68 3.28 4.78
1dbqA01 77.79 LacI family transcriptional regulator, purine nucleotide synthesis repressorHTH-type transcriptional repressor purREscherichia coli K-12 3.40.50.2300 134 11 68 3.11 4.57
8abpA01 76.87 ABC transportersL-arabinose-binding periplasmic proteinL-arabinose transport system substrate-binding proteinEscherichia coli K-12 3.40.50.2300 138 7 68 3.30 4.85
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1duvG01
SGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSG
SQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTRMHTIKAVMVATLSK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1duvG01
SGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSG
SQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTRMHTIKAVMVATLSK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:23

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"