CATH Domain: 1dusA00 XML data for domain: 1dusA00

Molscript image for 1dusA00
1dusA00
PDB coordinates for domain 1dusA00

PDB 1dus, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.150 Vaccinia Virus protein VP39 Gene3D
3.40.50.150.37
3.40.50.150.37.1
3.40.50.150.37.1.1
3.40.50.150.37.1.1.1
3.40.50.150.37.1.1.1.1

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Segment boundaries for domain 1dusA00

Chopping figure for domain 1dusA00
DomainStart PDB ResidueStop PDB Residue
1dusA00 4 197

Structural Neighbourhood (31 entries)

There are 31 matching structural neighberhood comparisons for CATH ID 3.40.50.150.37.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 31 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2b3tA02 84.89 Methyltransferase [EC:2.1.1.-]Protein methyltransferase hemKProtein bindingEscherichia coli K-12 3.40.50.150 192 20 82 1.75 2.11
1l3iA00 83.53 Methanothermobacter thermautotrophicus str. Delta HPorphyrin and chlorophyll metabolismProbable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]Precorrin-8W decarboxylase [EC:1.-.-.-]Metabolic pathways 3.40.50.150 178 18 82 2.63 3.20
1nv8A02 83.14 Thermotoga maritimaMethyltransferase [EC:2.1.1.-]HemK protein 3.40.50.150 197 18 83 2.06 2.47
1ne2B00 82.07 Putative uncharacterized protein Ta1320Putative methylaseThermoplasma acidophilum 3.40.50.150 180 16 80 3.86 4.78
2frnA02 81.78 3.40.50.150 185 13 86 2.77 3.20
3cggA00 81.67 SAM-dependent methyltransferasesCorynebacterium glutamicum 3.40.50.150 184 13 82 3.47 4.19
3bxoA01 81.49 Streptomyces venezuelaeN,N-dimethyltransferase 3.40.50.150 177 12 83 3.61 4.31
2fpoC00 81.39 Ribosomal RNA small subunit methyltransferase D [EC:2.1.1.52]RRNA (guanine-N2-)-methyltransferase activityRRNA base methylationProtein bindingEscherichia coli K-12 3.40.50.150 176 16 83 2.77 3.30
3bzbB00 81.30 Cyanidioschyzon merolae strain 10DUncharacterized protein 3.40.50.150 198 8 83 2.32 2.77
1m6yA01 80.97 Thermotoga maritimaS-adenosyl-methyltransferase [EC:2.1.1.-]S-adenosyl-L-methionine-dependent methyltransferase mraW 3.40.50.150 180 13 77 3.66 4.72
1i9gA02 80.82 POSSIBLE RNA METHYLTRANSFERASETRNA (adenine-N1-)-methyltransferase [EC:2.1.1.36]Mycobacterium tuberculosis 3.40.50.150 184 10 84 3.14 3.72
1xvaA02 80.73 S-adenosylhomocysteine metabolic processRattus norvegicusNucleusGlycine, serine and threonine metabolismGlycine N-methyltransferase activity 3.40.50.150 188 11 80 3.06 3.82
2yvlA02 80.67 TRNA (adenine-N1-)-methyltransferase [EC:2.1.1.36]Aquifex aeolicusPutative uncharacterized protein 3.40.50.150 189 13 82 2.44 2.97
1qamA01 80.37 Bacillus subtilisRRNA (adenine-N6-)-methyltransferase [EC:2.1.1.48]RRNA adenine N-6-methyltransferase 3.40.50.150 157 13 75 2.96 3.95
3c6kB03 80.01 Spermine synthaseArginine and proline metabolismSpermine synthase [EC:2.5.1.22]Glutathione metabolismMetabolic pathways 3.40.50.150 187 12 79 3.36 4.22
1xxlA00 79.75 Uncharacterized methyltransferase ycgJBacillus subtilis 3.40.50.150 231 9 64 2.32 3.62
2r6zB02 79.70 Neisseria gonorrhoeaeUPF0341 protein in rsp 3'region 3.40.50.150 185 10 82 3.86 4.66
2fhpA00 79.54 Methylase, putativeEnterococcus faecalis 3.40.50.150 177 16 86 3.05 3.53
2p8jA00 79.41 S-adenosylmethionine-dependent methyltransferaseClostridium acetobutylicum 3.40.50.150 200 15 75 2.91 3.88
1af7A02 79.05 Bacterial chemotaxisTwo-component systemChemotaxis protein methyltransferase CheR [EC:2.1.1.80]Salmonella enterica subsp. enterica serovar TyphimuriumChemotaxis protein methyltransferase 3.40.50.150 194 10 73 2.98 4.04
2i6gB00 78.74 Putative methyltransferaseSalmonella enterica subsp. enterica serovar Typhimurium 3.40.50.150 179 15 81 3.83 4.71
3busB00 77.16 Lechevalieria aerocolonigenesPutative D-glucose O-methyltransferase 3.40.50.150 236 15 65 2.84 4.32
2py6A03 76.82 Methylobacillus flagellatus KTMethyltransferase FkbM 3.40.50.150 177 8 76 3.64 4.75
1l1eB00 76.63 Cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]MYCOLIC ACID SYNTHASE PCAA (CYCLOPROPANE SYNTHASE)Mycobacterium tuberculosis 3.40.50.150 260 10 63 3.12 4.92
3cvoA00 76.29 Ruegeria pomeroyiPutative uncharacterized protein 3.40.50.150 186 9 72 2.98 4.09
1g55A02 76.20 DNA (cytosine-5-)-methyltransferase activityCysteine and methionine metabolismDNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]Homo sapiensTRNA (cytosine-5-)-methyltransferase 3.40.50.150 180 11 66 3.11 4.67
2dpmA01 75.89 DNA adenine methylase [EC:2.1.1.72]Modification methylase DpnIIAMismatch repairStreptococcus pneumoniae 3.40.50.150 155 12 71 3.13 4.39
1yf3A01 75.68 DNA adenine methylaseEnterobacteria phage T4 3.40.50.150 164 10 67 3.06 4.52
2a4kB01 74.81 3.40.50.720 196 7 61 2.93 4.75
1pjzA00 72.67 Pseudomonas syringae pv. pisiThiopurine S-methyltransferase 3.40.50.150 201 9 73 3.64 4.94
3hhpA01 72.62 Citrate cycle (TCA cycle)Pyruvate metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysMalate dehydrogenase [EC:1.1.1.37] 3.40.50.720 138 6 60 2.88 4.77
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Displaying entries 1 to 31 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1dusA00
FSEKPTTKSDVKIVEDILRGKKLKFKTDSGVFSYGKVDKGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTAD
INRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ
GAKSLAKYKDVFGNVETVTIKGGYRVLKSKKL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1dusA00
FSEKPTTKSDVKIVEDILRGKKLKFKTDSGVFSYGKVDKGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTXA
DINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK
QGAKSLAKYXKDVFGNVETVTIKGGYRVLKSKKL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:12

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:12

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:34

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"