CATH Domain: 1dqgA00 XML data for domain: 1dqgA00

Molscript image for 1dqgA00
1dqgA00
PDB coordinates for domain 1dqgA00

PDB 1dqg, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.80 Trefoil
2.80.10 Trefoil (Acidic Fibroblast Growth Factor, subunit A)
2.80.10.50 Gene3D
2.80.10.50.14
2.80.10.50.14.1
2.80.10.50.14.1.1
2.80.10.50.14.1.1.1
2.80.10.50.14.1.1.1.1

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Segment boundaries for domain 1dqgA00

Chopping figure for domain 1dqgA00
DomainStart PDB ResidueStop PDB Residue
1dqgA00 2 135

Structural Neighbourhood (15 entries)

There are 15 matching structural neighberhood comparisons for CATH ID 2.80.10.50.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 15 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1m2tB02 86.17 Beta-galactoside-specific lectin 1Viscum album 2.80.10.50 124 18 89 2.06 2.30
1vclA02 85.58 Cucumaria echinataHemolytic lectin CEL-III 2.80.10.50 134 18 91 3.03 3.33
1upsA02 84.56 Clostridium perfringensGlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase 2.80.10.50 133 9 91 3.10 3.40
1w3fA01 83.54 Laetiporus sulphureusHemolytic lectin LSLa 2.80.10.50 147 10 83 2.93 3.50
1jlxA02 82.80 Amaranthus caudatusAgglutinin 2.80.10.50 140 2 85 2.70 3.15
1n4kA01 82.59 MicrosomeVoluntary musculoskeletal movementNucleolusPhosphoinositide bindingSarcoplasmic reticulum 2.80.10.50 141 5 84 2.76 3.27
1dfcA03 82.23 FascinActin cytoskeletonActin filament bundle assemblyHomo sapiensCell proliferation 2.80.10.50 123 12 85 3.03 3.53
2fdbN00 80.73 Type 2 fibroblast growth factor receptor bindingMesonephros developmentPositive regulation of cell proliferationType 1 fibroblast growth factor receptor bindingExtracellular space 2.80.10.50 148 7 78 2.88 3.67
1dfcA01 80.36 FascinActin cytoskeletonActin filament bundle assemblyHomo sapiensCell proliferation 2.80.10.50 122 6 84 4.04 4.79
1dfcA02 79.92 FascinActin cytoskeletonActin filament bundle assemblyHomo sapiensCell proliferation 2.80.10.50 123 12 85 3.44 4.04
1t9fA00 78.87 Caenorhabditis elegansPutative uncharacterized protein 2.80.10.50 178 9 69 3.31 4.75
1dfcA04 77.89 FascinActin cytoskeletonActin filament bundle assemblyHomo sapiensCell proliferation 2.80.10.50 107 9 73 2.28 3.12
1hcdA00 76.02 Membrane fractionPlasma membraneActin filament bindingHisactophilin-1Cytosol 2.80.10.50 118 6 85 3.57 4.20
3iagC02 75.72 Transcription factor bindingHeart developmentRegulation of timing of cell differentiationDefense response to bacteriumNotch signaling pathway 2.80.10.50 155 7 60 2.70 4.50
1epwA04 73.95 Bontoxilysin [EC:3.4.24.69]Clostridium botulinumBotulinum neurotoxin type B 2.80.10.50 191 9 63 3.03 4.78
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Displaying entries 1 to 15 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1dqgA00
DARQFLIYNEDHKRCVDALSAISVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSKTDWASVTLYACDSKSEYQKW
ECKNDTLFGIKGTELYFNYGNRQEKNIKLYKGSGLWSRWKVYGTTDDLCSRGYE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1dqgA00
LDARQFLIYNEDHKRCVDALSAISVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSKTDWASVTLYACDSKSEYQK
WECKNDTLFGIKGTELYFNYGNRQEKNIKLYKGSGLWSRWKVYGTTDDLCSRGYE
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:10

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"