CATH Domain: 1dq3A01 XML data for domain: 1dq3A01

Molscript image for 1dq3A01
1dq3A01
PDB coordinates for domain 1dq3A01

PDB 1dq3, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.170 Beta Complex
2.170.16 Endonuclease - Pi-scei; Chain A, domain 1
2.170.16.10 Endonuclease - Pi-scei; Chain A, domain 1 Gene3D
2.170.16.10.2
2.170.16.10.2.1
2.170.16.10.2.1.1
2.170.16.10.2.1.1.1
2.170.16.10.2.1.1.1.1

[top]
Segment boundaries for domain 1dq3A01

Chopping figure for domain 1dq3A01
DomainStart PDB ResidueStop PDB Residue
1dq3A01 1 137
1dq3A01 415 454
1dq3A02 339 414
1dq3A03 138 224
1dq3A04 225 338

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.170.16.10.2.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1mi8A00 85.25 DNA replicationReplicative DNA helicase [EC:3.6.1.-]Replicative DNA helicaseSynechocystis sp. PCC 6803 2.170.16.10 141 19 77 2.29 2.96
1at0A00 83.37 Germ cell attractionHedgehog signaling pathwayMorphogen activityPositive regulation of smoothened signaling pathwayGenital disc anterior/posterior pattern formation 2.170.16.10 142 11 76 2.49 3.26
[1]
Displaying entries 1 to 2 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1dq3A01
CIDGKAKIIFENEGEEHLTTMEEMYERYKHLGEFYDEEYNRWGIDVSNVPIYVKSFDPESKRVVKGKVNVIWKYELGKDV
TKYEIITNKGTKILTSPWHPFFVLTPDFKIVEKRADELKEGDILIGGMPDGEDYKFIGLEVVRHITTTNEPRTFYDLTVE
NYQNYLAGENGMIFVHN
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1dq3A01
CIDGKAKIIFENEGEEHLTTMEEMYERYKHLGEFYDEEYNRWGIDVSNVPIYVKSFDPESKRVVKGKVNVIWKYELGKDV
TKYEIITNKGTKILTSPWHPFFVLTPDFKIVEKRADELKEGDILIGGMPDGEDYKFIGLEVVRHITTTNEPRTFYDLTVE
NYQNYLAGENGMIFVHN
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:49

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:49

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:22

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"