CATH Domain: 1dp7P00 XML data for domain: 1dp7P00

Molscript image for 1dp7P00
1dp7P00
PDB coordinates for domain 1dp7P00

PDB 1dp7, Chain P, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.10 Arc Repressor Mutant, subunit A
1.10.10.10 "winged helix" repressor DNA binding domain Gene3D
1.10.10.10.6
1.10.10.10.6.1
1.10.10.10.6.1.1
1.10.10.10.6.1.1.1
1.10.10.10.6.1.1.1.1

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Segment boundaries for domain 1dp7P00

Chopping figure for domain 1dp7P00
DomainStart PDB ResidueStop PDB Residue
1dp7P00 1 76

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 1.10.10.10.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lddA00 81.20 Mitotic sister chromatid segregationProtein ubiquitinationCyclin catabolic processMeiosis - yeastAnaphase-promoting complex subunit 2 1.10.10.10 74 0 78 3.53 4.47
3cuqA02 80.38 ESCRT-II complex subunit VPS22Transcription factor bindingRegulation of transcription from RNA polymerase II promoterHomo sapiensVacuolar-sorting protein SNF8 1.10.10.10 81 9 80 3.79 4.72
1ka8A00 79.75 Putative P4-specific DNA primaseEnterobacteria phage P4 1.10.10.10 100 11 70 2.14 3.06
2ezhA00 78.93 TransposaseEnterobacteria phage Mu 1.10.10.60 65 12 77 3.86 4.97
1lvaA03 77.72 Selenocysteine-specific elongation factorSelenocysteine-specific elongation factorMoorella thermoacetica 1.10.10.10 62 9 71 3.49 4.91
1bobA03 72.91 Chromatin silencing at telomereHistone acetyltransferase 1 [EC:2.3.1.48]Histone acetyltransferase type B catalytic subunitHistone acetyltransferase activityProtein binding 1.10.10.390 54 7 57 2.58 4.46
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1dp7P00
TVQWLLDNYETAEGVSLPRSTLYNHYLLHSQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1dp7P00
TVQWLLDNYETAEGVSLPRSTLYNHYLLHSQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:02

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:02

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:23

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"