CATH Domain: 1dgwA00 XML data for domain: 1dgwA00

Molscript image for 1dgwA00
1dgwA00
PDB coordinates for domain 1dgwA00

PDB 1dgw, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.10 Jelly Rolls Gene3D
2.60.120.10.20
2.60.120.10.20.1
2.60.120.10.20.1.1
2.60.120.10.20.1.1.1
2.60.120.10.20.1.1.1.1

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Segment boundaries for domain 1dgwA00

Chopping figure for domain 1dgwA00
DomainStart PDB ResidueStop PDB Residue
1dgwA00 46 223

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 2.60.120.10.20.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3c3vA01 79.70 Arachis hypogaeaArachin Arah3 isoform 2.60.120.10 227 15 74 3.25 4.39
2d5fA01 79.68 Glycine maxGlycinin A3B4 subunit 2.60.120.10 226 19 75 2.75 3.66
1o4tA00 76.79 Thermotoga maritimaPutative uncharacterized protein 2.60.120.10 115 13 60 2.80 4.66
1vj2A00 76.25 Thermotoga maritimaPutative uncharacterized protein 2.60.120.10 114 12 61 2.80 4.53
2opkB01 74.43 Ralstonia eutropha JMP134Cupin 2 domain-containing proteinPutative uncharacterized protein 2.60.120.10 90 14 48 2.18 4.46
1y9qA02 74.39 Vibrio choleraeTranscriptional regulator, HTH_3 family 2.60.120.10 90 13 49 2.35 4.75
2q30A01 74.37 Desulfovibrio desulfuricans subsp. desulfuricans str. G20Putative uncharacterized protein 2.60.120.10 85 17 46 2.09 4.48
1qwrA02 74.05 Amino sugar and nucleotide sugar metabolismBacillus subtilisMannose-6-phosphate isomerase [EC:5.3.1.8]Putative mannose-6-phosphate isomerase yvyIFructose and mannose metabolism 2.60.120.10 86 16 48 2.13 4.41
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1dgwA00
NNPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPD
GRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASYDSPYDE
IEQTLLQEEQEGVIVKMP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1dgwA00
NNPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPD
GRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASYDSPYDE
IEQTLLQEEQEGVIVKMP
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:02

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"